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Complete sequence, analysis and organization of the Orgyia leucostigma nucleopolyhedrovirus genome

Research output: Contribution to Journal/Magazine › Journal article › peer-review

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Complete sequence, analysis and organization of the Orgyia leucostigma nucleopolyhedrovirus genome. / Thumbi, David; Eveleigh, Rob; Lucarotti, Christopher et al.
In: Viruses, Vol. 3, 2011, p. 2301-2327.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Harvard

Thumbi, D, Eveleigh, R, Lucarotti, C, Lapointe, R, Graham, RI, Pavlik, L, Lauzon, H & Arif, B 2011, 'Complete sequence, analysis and organization of the Orgyia leucostigma nucleopolyhedrovirus genome', Viruses, vol. 3, pp. 2301-2327. https://doi.org/10.3390/v3112301

APA

Thumbi, D., Eveleigh, R., Lucarotti, C., Lapointe, R., Graham, R. I., Pavlik, L., Lauzon, H., & Arif, B. (2011). Complete sequence, analysis and organization of the Orgyia leucostigma nucleopolyhedrovirus genome. Viruses, 3, 2301-2327. https://doi.org/10.3390/v3112301

Vancouver

Thumbi D, Eveleigh R, Lucarotti C, Lapointe R, Graham RI, Pavlik L et al. Complete sequence, analysis and organization of the Orgyia leucostigma nucleopolyhedrovirus genome. Viruses. 2011;3:2301-2327. doi: 10.3390/v3112301

Author

Thumbi, David ; Eveleigh, Rob ; Lucarotti, Christopher et al. / Complete sequence, analysis and organization of the Orgyia leucostigma nucleopolyhedrovirus genome. In: Viruses. 2011 ; Vol. 3. pp. 2301-2327.

Bibtex

@article{9e06babc21e54416b2edf559d7a6fcfc,
title = "Complete sequence, analysis and organization of the Orgyia leucostigma nucleopolyhedrovirus genome",
abstract = "The complete genome of the Orgyia leucostigma nucleopolyhedrovirus (OrleNPV) isolated from the whitemarked tussock moth (Orgyia leucostigma, Lymantridae: Lepidoptera) was sequenced, analyzed, and compared to other baculovirus genomes. The size of the OrleNPV genome was 156,179 base pairs (bp) and had a G+C content of 39%. The genome encoded 135 putative open reading frames (ORFs), which occupied 79% of the entire genome sequence. Three inhibitor of apoptosis (ORFs 16, 43 and 63), and five baculovirus repeated ORFs (bro-a through bro-e) were interspersed in the OrleNPV genome. In addition to six direct repeat (drs), a common feature shared among most baculoviruses, OrleNPV genome contained three homologous regions (hrs) that are located in the latter half of the genome. The presence of an F-protein homologue and the results from phylogenetic analyses placed OrleNPV in the genus Alphabaculovirus, group II. Overall, OrleNPV appears to be most closely related to group II alphabaculoviruses Ectropis obliqua (EcobNPV), Apocheima cinerarium (ApciNPV), Euproctis pseudoconspersa (EupsNPV), and Clanis bilineata (ClbiNPV). ",
author = "David Thumbi and Rob Eveleigh and Christopher Lucarotti and Rene Lapointe and Graham, {Robert Iain} and L Pavlik and H Lauzon and Basil Arif",
year = "2011",
doi = "10.3390/v3112301",
language = "English",
volume = "3",
pages = "2301--2327",
journal = "Viruses",
publisher = "MDPI AG",

}

RIS

TY - JOUR

T1 - Complete sequence, analysis and organization of the Orgyia leucostigma nucleopolyhedrovirus genome

AU - Thumbi, David

AU - Eveleigh, Rob

AU - Lucarotti, Christopher

AU - Lapointe, Rene

AU - Graham, Robert Iain

AU - Pavlik, L

AU - Lauzon, H

AU - Arif, Basil

PY - 2011

Y1 - 2011

N2 - The complete genome of the Orgyia leucostigma nucleopolyhedrovirus (OrleNPV) isolated from the whitemarked tussock moth (Orgyia leucostigma, Lymantridae: Lepidoptera) was sequenced, analyzed, and compared to other baculovirus genomes. The size of the OrleNPV genome was 156,179 base pairs (bp) and had a G+C content of 39%. The genome encoded 135 putative open reading frames (ORFs), which occupied 79% of the entire genome sequence. Three inhibitor of apoptosis (ORFs 16, 43 and 63), and five baculovirus repeated ORFs (bro-a through bro-e) were interspersed in the OrleNPV genome. In addition to six direct repeat (drs), a common feature shared among most baculoviruses, OrleNPV genome contained three homologous regions (hrs) that are located in the latter half of the genome. The presence of an F-protein homologue and the results from phylogenetic analyses placed OrleNPV in the genus Alphabaculovirus, group II. Overall, OrleNPV appears to be most closely related to group II alphabaculoviruses Ectropis obliqua (EcobNPV), Apocheima cinerarium (ApciNPV), Euproctis pseudoconspersa (EupsNPV), and Clanis bilineata (ClbiNPV).

AB - The complete genome of the Orgyia leucostigma nucleopolyhedrovirus (OrleNPV) isolated from the whitemarked tussock moth (Orgyia leucostigma, Lymantridae: Lepidoptera) was sequenced, analyzed, and compared to other baculovirus genomes. The size of the OrleNPV genome was 156,179 base pairs (bp) and had a G+C content of 39%. The genome encoded 135 putative open reading frames (ORFs), which occupied 79% of the entire genome sequence. Three inhibitor of apoptosis (ORFs 16, 43 and 63), and five baculovirus repeated ORFs (bro-a through bro-e) were interspersed in the OrleNPV genome. In addition to six direct repeat (drs), a common feature shared among most baculoviruses, OrleNPV genome contained three homologous regions (hrs) that are located in the latter half of the genome. The presence of an F-protein homologue and the results from phylogenetic analyses placed OrleNPV in the genus Alphabaculovirus, group II. Overall, OrleNPV appears to be most closely related to group II alphabaculoviruses Ectropis obliqua (EcobNPV), Apocheima cinerarium (ApciNPV), Euproctis pseudoconspersa (EupsNPV), and Clanis bilineata (ClbiNPV).

U2 - 10.3390/v3112301

DO - 10.3390/v3112301

M3 - Journal article

VL - 3

SP - 2301

EP - 2327

JO - Viruses

JF - Viruses

ER -