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Centre for Biophotonics

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  1. Published

    Understanding and harnessing the health effects of rapid urbanization in China.

    Zhu, Y-G., Ioannidis, J. P. A., Li, H., Jones, K. C., Martin, F. L., Yong-Guan Zhu & Francis L. Martin, 2011, In: Environmental Science and Technology. 45, 12, p. 5099-5104 6 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  2. Published

    A new multimedia contaminant fate model for China: how important are environmental parameters in influencing chemical persistence and long-range transport potential?

    Zhu, Y., Price, O. R., Tao, S., Jones, K. C. & Sweetman, A., 08/2014, In: Environment International. 69, p. 18-27 10 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  3. Published

    Environmental distributions of benzo[a]pyrene in China: current and future emission reduction scenarios explored using a spatially explicit multimedia fate model

    Zhu, Y., Tao, S., Price, O. R., Shen, H., Jones, K. C. & Sweetman, A. J., 1/12/2015, In: Environmental Science and Technology. 49, 23, p. 13868–13877 10 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  4. Published

    Elevated mobility of persistent organic pollutants in the soil of a tropical rainforest

    Zheng, Q., Nizzetto, L., Liu, X., Borgå, K., Starrfelt, J., Li, J., Jiang, Y., Liu, X., Jones, K. C. & Zhang, G., 7/04/2015, In: Environmental Science and Technology. 49, 7, p. 4302-4309 8 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  5. Published

    Applicability of western chemical dietary exposure models to the Chinese population

    Zhao, S., Price, O., Liu, Z., Jones, K. C. & Sweetman, A. J., 07/2015, In: Environmental Research. 140, p. 165-176 12 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  6. Published

    Use of diffusive gradients in thin-films for studies of chemical speciation and bioavailability

    Zhang, H. & Davison, W., 25/03/2015, In: Environmental Chemistry. 12, 2, p. 85-101 17 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  7. Published

    Environmental monitoring of organo-halogenated contaminants (OHCs) in surface soils from Pakistan

    Zehra, A., Eqani, S. A. M. A. S., Katsoyiannis, A., Schuster, J. K., Moeckel, C., Jones, K. C. & Malik, R. N., 15/02/2015, In: Science of the Total Environment. 506–507, p. 344-352 9 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  8. Published

    Stratigraphy of the Anthropocene

    Zalasiewicz, J., Williams, M., Fortey, R., Smith, A., Barry, T. L., Coe, A. L., Bown, P. R., Rawson, P. F., Gale, A., Gibbard, P., Gregory, F. . J., Hounslow, M., Kerr, A. C., Pearson, P., Knox, R., Powell, J., Waters, C., Marshall, J., Oates, M. & Stone, P., 03/2011, In: Philosophical Transactions of the Royal Society of London A. 369, 1938, p. 1036 1055 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  9. Published

    Current status of persistent organic pesticides residues in air, water, and soil, and their possible effect on neighboring countries: a comprehensive review of India

    Yadav, I. C., Devi, N. L., Syed, J. H., Cheng, Z., Li, J., Zhang, G. & Jones, K. C., 1/04/2015, In: Science of the Total Environment. 511, p. 123-137 15 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  10. Published

    The spatial distribution and potential sources of polycyclic aromatic hydrocarbons (PAHs) over the Asian marginal seas and the Indian and Atlantic Oceans

    Xu, Y., Zhang, Y-L., Li, J., Gioia, R., Zhang, G., Li, X-D., Spiro, B., Bhatia, R. S. & Jones, K. C., 4/04/2012, In: Journal of Geophysical Research: Atmospheres. 117, D7, 10 p., D07302.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  11. Published

    Atmospheric polychlorinated naphthalenes (PCNs) in India and Pakistan

    Xu, Y., Li, J., Chakraborty, P., Syed, J. H., Malik, R. N., Wang, Y., Tian, C., Luo, C., Zhang, G. & Jones, K. C., 1/01/2014, In: Science of the Total Environment. 466–467, p. 1030-1036 7 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  12. Published

    Industrial source identification and emission estimation of perfluorooctane sulfonate in China

    Xie, S., Wang, T., Liu, S., Jones, K. C., Sweetman, A. J. & Lu, Y., 02/2013, In: Environment International. 52, p. 1-8 8 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  13. Published

    Estimation of PFOS emission from domestic sources in the eastern coastal region of China

    Xie, S., Lu, Y., Wang, T., Liu, S., Jones, K. & Sweetman, A., 09/2013, In: Environment International. 59, p. 336-343 8 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  14. Published

    Organic matter-solid phase interactions are critical for predicting arsenic release and plant uptake in Bangladesh paddy soils

    Williams, P. N., Zhang, H., Davison, W., Meharg, A. A., Hossain, M., Norton, G. J., Brammer, H. & Islam, M. R., 2011, In: Environmental Science and Technology. 45, 14, p. 6080-6087 8 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  15. Published

    Towards a consistent Oxfordian/Kimmeridgian global boundary: current state of knowledge

    Wierzbowski, A., Atrops, F., Grabowski, J., Hounslow, M. W., Matyja, B., Oloriz, F., Page, K., Parent, H., Rogov, M., Schweigert, G., Villasenor, A., Wierzbowski, H. & Wright, J., 2016, In: Volumina Jurassica. 14, 1, p. 15-50 36 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  16. Published

    Challenges in assessing release, exposure and fate of silver nanoparticles within the UK environment

    Whiteley, C. M., Valle, M. D., Jones, K. C. & Sweetman, A., 11/2013, In: Environmental Science: Processes and Impacts. 15, 11, p. 2050-2058 9 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  17. Published

    Carbapenemase-producing Enterobacteriaceae in hospital wastewater: a reservoir that may be unrelated to clinical isolates [star]

    White, L., Hopkins, K., Meunier, D., Perry, C. L., Pike, R., Wilkinson, P., Pickup, R. W., Cheesbrough, J. & Woodford, N., 06/2016, In: Journal of Hospital Infection. 93, 2, p. 145-151 7 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  18. Published

    Persistent organic pollutants in the Tibetan surface soil: spatial distribution, air–soil exchange and implications for global cycling

    Wang, X., Sheng, J., Gong, P., Xue, Y., Yao, T. & Jones, K. C., 11/2012, In: Environmental Pollution. 170, p. 145-151 7 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  19. Published

    Accumulation of perfluoroalkyl compounds in Tibetan mountain snow: temporal patterns from 1980 to 2010

    Wang, X., Halsall, C., Codling, G., Xie, Z., Xu, B., Zhao, Z., Xue, Y., Ebinghaus, R. & Jones, K., 7/01/2014, In: Environmental Science and Technology. 48, 1, p. 173-181 9 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  20. Published

    Remoteness from Emission Sources Explains the Fractionation Pattern of Polychlorinated Biphenyls in the Northern Hemisphere

    von Waldow, H., MacLeod, M., Jones, K., Scheringer, M. & Hungerbuehler, K., 15/08/2010, In: Environmental Science and Technology. 44, 16, p. 6183-6188 6 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  21. Published

    Late Quaternary sediments from deep-sea sediment drifts on the Antarctic Peninsula Pacific margin: climatic control on provenance of minerals

    Venuti, A., Florindo, F., Caburlotto, A., Hounslow, M. W., Hillenbrand, C. D., Strada, E., Talarico, F. M. & Cavallo, A., 21/06/2011, In: Journal of Geophysical Research: Solid Earth. 116, B6, 18 p., B06104.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  22. Published

    In situ measurement of redox sensitive solutes at high spatial resolution in a riverbed using Diffusive Equilibrium in Thin Films (DET)

    Ullah, S., Zhang, H., Heathwaite, L., Binley, A., Lansdown, K., Heppell, C. M. & Trimmer, M., 12/2012, In: Ecological Engineering. 49, p. 18-26 9 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  23. Published

    Sublethal genotoxicity and cell alterations by organophosphorus pesticides in MCF-7 cells: implications for environmentally relevant concentrations

    Ukpebor, J., Llabjani, V., Martin, F. & Halsall, C. J., 2011, In: Environmental Toxicology and Chemistry. 30, 3, p. 632-639 8 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  24. Published

    Multi-scale heterogeneity in rhyolitic lava at Hrafntinnuhryggur, Krafla, Iceland

    Tuffen, H., Castro, J. M., Woodroffe, N. & Hounslow, M., 1/05/2010. 0 p.

    Research output: Contribution to conference - Without ISBN/ISSN › Conference paper

  25. Published

    Syrian hamster embryo (SHE) assay (pH 6.7) coupled with infrared spectroscopy and chemometrics towards toxicological assessment

    Trevisan, J., Angelov, P. P., Patel, I. I., Najand, G. M., Cheung, K. T., Llabjani, V., Pollock, H. M., Bruce, S. W., Pant, K., Carmichael, P. M., Scott, A. D. & Martin, F. L., 11/2010, In: Analyst. 135, 12, p. 3266-3272 7 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  26. Published

    Extracting biological information with computational analysis of Fourier transform infrared (FTIR) biospectroscopy datasets: current practices to future perspectives

    Trevisan, J., Angelov, P., Carmichael, P. L., Scott, A. & Martin, F., 2012, In: Analyst. 137, 14, p. 3202-3215 14 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  27. Published

    Designing open, multi-class computational strategies to classify infrared spectroscopy data derived from the Syrian hamster embryo (SHE) assay

    Trevisan, J., Angelov, P. P., Carmichael, P. L., Scott, A. D. & Martin, F. L., 01/2012, In: Mutagenesis. 27, 1, p. 111-111 1 p.

    Research output: Contribution to Journal/Magazine › Meeting abstract › peer-review

  28. Published

    A mathematical framework for spectroscopy data analysis to characterize chemical-induced alterations in the SHE assay

    Trevisan, J., Angelov, P. P., Carmichael, P. L., Scott, A. D. & Martin, F. L., 11/2010, In: Mutagenesis. 25, 6, p. 658-658 1 p.

    Research output: Contribution to Journal/Magazine › Meeting abstract › peer-review

  29. Published

    Advances in Fourier-transform infrared spectroscopy analysis to characterise chemical-induced alterations in the Syrian hamster embryo assay-towards biomarkers stability

    Trevisan, J., Angelov, P. P., Carmichael, P. L., Scott, A. & Martin, F. L., 11/2012, In: Mutagenesis. 27, 6, p. 792-792 1 p.

    Research output: Contribution to Journal/Magazine › Meeting abstract › peer-review

  30. Published

    Measuring similarity and improving stability in biomarker identification methods applied to Fourier-transform infrared (FTIR) spectroscopy

    Trevisan, J., Park, J., Angelov, P., Ahmadzai, A., Gajjar, K., Scott, A. D., Carmichael, P. L. & Martin, F., 04/2014, In: Journal of Biophotonics. 7, 3-4, p. 254-265 12 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  31. Published

    A computational protocol and software implementation (as a MATLAB application) for biomaker identification in infrared spectroscopy datasets

    Trevisan, J., Angelov, P. & Martin, F., 2010, In: Nature Protocols.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  32. Published

    IRootLab: A free and open-source MATLAB toolbox for vibrational biospectroscopy data analysis

    Trevisan, J., Angelov, P. P., Scott, A. D., Carmichael, P. L. & Martin, F. L., 15/04/2013, In: Bioinformatics. 29, 8, p. 1095-1097 3 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  33. Published

    Nanoscale spatial resolution probes for Scanning Thermal Microscopy of solid state materials

    Tovee, P., Pumarol, M., Zeze, D., Kjoller, K. & Kolosov, O., 27/10/2011, In: arxiv.org.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  34. Published

    Nanoscale spatial resolution probes for scanning thermal microscopy of solid state materials

    Tovee, P., Pumarol Crestar, M., Zeze, D., Kjoller, K. & Kolosov, O., 7/12/2012, In: Journal of Applied Physics. 112, 11, 11 p., 114317.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  35. Published

    Additions and corrections to Association of DNA Methylation and Mitochondrial DNA Copy Number with Human Semen Quality

    Tian, M., Bao, H., Martin, F. L., Zhang, J., Liu, L., Huang, Q. & Shen, H., 1/03/2015, In: Biology of Reproduction. 92, 3, p. 61 1 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  36. Published

    Assessment of MTBE biodegradation in contaminated groundwater using 13C and 14C analysis: field and laboratory microcosm studies

    Thornton, S., Bottrell, S., Spence, K., Pickup, R., Spence, M., Mallinson, H., Shah, N. & Richnow, H. R., 05/2011, In: Applied Geochemistry. 26, 5, p. 828-837 9 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  37. Published

    Low leakage-current InAsSb nanowire photodetectors on silicon

    Thompson, M. D., Alhodaib, A., Craig, A. P., Robson, A. J., Aziz, A., Krier, A., Svensson, J., Wernersson, L., Sanchez, A. M. & Marshall, A. R. J., 13/01/2016, In: Nano Letters. 16, 1, p. 182-187 6 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  38. Published

    Extracting biomarkers of commitment to cancer development: potential role of vibrational spectroscopy in systems biology

    Theophilou, G., Paraskevaidi, M., Gomes De Lima, K. M., Kyrgiou, M., Martin-Hirsch, P. L. & Martin, F. L., 4/05/2015, In: Expert Review of Molecular Diagnostics. 15, 5, p. 693-713 21 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  39. Published

    A biospectroscopic analysis of human prostate tissue obtained from different time periods points to a trans-generational alteration in spectral phenotype

    Theophilou, G., Gomes De Lima, K. M., Briggs, M., Martin-Hirsch, P. L., Stringfellow, H. F. & Martin, F. L., 27/08/2015, In: Scientific Reports. 5, 14 p., 13465.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  40. Published

    Forest filter effect: role of leaves in capturing/releasing air particulate matter and its associated PAHs

    Terzaghi, E., Wild, E., Zacchello, G., Cerabolini, B. E. L., Jones, K. C. & Di Guardo, A., 08/2013, In: Atmospheric Environment. 74, p. 378-384 7 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  41. Published

    Towards more ecologically realistic scenarios of plant uptake modelling for chemicals: PAHs in a small forest

    Terzaghi, E., Zacchello, G., Scacchi, M., Raspa, G., Jones, K. C., Cerabolini, B. & Di Guardo, A., 1/02/2015, In: Science of the Total Environment. 505, p. 329-337 9 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  42. Published

    Estimation of polycyclic aromatic hydrocarbon variability in air using high volume, film, and vegetation as samplers

    Terzaghi, E., Scacchi, M., Cerabolini, B., Jones, K. C. & Di Guardo, A., 5/05/2015, In: Environmental Science and Technology. 49, 9, p. 5520-5528 9 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  43. Published

    Organochlorine pesticides in air and soil and estimated air–soil exchange in Punjab, Pakistan

    Syed, J. H., Malik, R. N., Liu, D., Xu, Y., Wang, Y., Li, J., Zhang, G. & Jones, K. C., 1/02/2013, In: Science of the Total Environment. 444, p. 491-497 7 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  44. Published

    Levels, distribution and air-soil exchange fluxes of polychlorinated biphenyls (PCBs) in the environment of Punjab Province, Pakistan

    Syed, J. H., Malik, R. N., Li, J., Zhang, G. & Jones, K. C., 1/11/2013, In: Ecotoxicology and Environmental Safety. 97, p. 189-195 7 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  45. Published

    Levels, profile and distribution of Dechloran Plus (DP) and Polybrominated Diphenyl Ethers (PBDEs) in the environment of Pakistan

    Syed, J. H., Malik, R. N., Li, J., Wang, Y., Xu, Y., Zhang, G. & Jones, K. C., 11/2013, In: Chemosphere. 93, 8, p. 1646-1653 8 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  46. Published

    Status, distribution and ecological risk of organochlorines (OCs) in the surface sediments from the Ravi River, Pakistan

    Syed, J. H., Malik, R. N., Li, J., Chaemfa, C., Zhang, G. & Jones, K. C., 15/02/2014, In: Science of the Total Environment. 472, p. 204-211 8 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  47. Published

    OSA: one-class recursive SVM algorithm with negative samples for fault detection

    Suvorov, M., Ivliev, S., Markarian, G., Kolev, D., Zvikhachevskiy, D. & Angelov, P., 2013, Artificial neural networks and machine learning – ICANN 2013: 23rd International Conference on Artificial Neural Networks Sofia, Bulgaria, September 10-13, 2013. Proceedings. Mladenov, V., Koprinkova-Hristova, P., Palm, G., Villa, A. E. P., Appollini, B. & Kasabov, N. (eds.). Berlin: Springer Verlag, p. 194-207 14 p. (Lecture Notes in Computer Science; vol. 8131).

    Research output: Contribution in Book/Report/Proceedings - With ISBN/ISSN › Conference contribution/Paper › peer-review

  48. Published

    Incremental anomaly identification by adapted SVM method

    Suvorov, M., Ivliev, S., Markarian, G., Kolev, D., Zvikhachevskiy, D. & Angelov, P., 08/2013, International Joint Conference on Neural Networks, IJCNN-2013, Dallas, TX, USA, 3-9 August, 2013. Piscataway, N.J.: IEEE, p. 1-8 8 p.

    Research output: Contribution in Book/Report/Proceedings - With ISBN/ISSN › Conference contribution/Paper › peer-review

  49. Published

    Development and characterisation of a new Sr selective resin for the rapid determination of 90Sr in environmental water samples.

    Surman, J., Pates, J., Zhang, H. & Happel, S., 1/11/2014, In: Talanta. 129, p. 623-628 6 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  50. Published

    Environmentally relevant levels of the genotoxin cyclophosphamide induce alterations in MCF-7 cells detectable by biospectroscopy approaches

    Strong, R., Halsall, C. J., Jones, K. C. & Martin, F. L., 11/2012, In: Mutagenesis. 27, 6, p. 814-814 1 p.

    Research output: Contribution to Journal/Magazine › Meeting abstract › peer-review

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