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Professor Joanne Knight

Chair in Applied Data Science, Reader in Applied Data Science

  1. Published

    Age at first birth in women is genetically associated with increased risk of schizophrenia

    Schizophrenia Working Group of the Psychiatric Genomics Consortium, 5/07/2018, In: Scientific Reports. 8, 1, 14 p., 10168.

    Research output: Contribution to journalJournal articlepeer-review

  2. Published

    Estimation of Genetic Correlation via Linkage Disequilibrium Score Regression and Genomic Restricted Maximum Likelihood

    Schizophrenia Working Group of the Psychiatric Genomics Consortium, 7/06/2018, In: American Journal of Human Genetics. 102, 6, p. 1185-1194 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  3. Published

    NADPH oxidase (CYBA) and FcgammaR polymorphisms as risk factors for aggressive periodontitis: a case-control association study

    Nibali, L., Parkar, M., Brett, P., Knight, J., Tonetti, M. S. & Griffiths, G. S., 08/2006, In: Journal of Clinical Periodontology. 33, 8, p. 529-539 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  4. Published

    Investigation of the ability of haplotype association and logistic regression to identify associated susceptibility loci

    North, B. V., Sham, P. C., Knight, J., Martin, E. R. & Curtis, D., 11/2006, In: Annals of Human Genetics. 70, 6, p. 893-906 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  5. Published

    Association of the serotonin transporter gene, neuroticism and smoking behaviours

    O'Gara, C., Knight, J., Stapleton, J., Luty, J., Neale, B., Nash, M., Heuzo-Diaz, P., Hoda, F., Cohen, S., Sutherland, G., Collier, D., Sham, P., Ball, D., McGuffin, P. & Craig, I., 2008, In: Journal of Human Genetics . 53, 3, p. 239-246 8 p.

    Research output: Contribution to journalJournal articlepeer-review

  6. Published

    Mutations in IL36RN/IL1F5 are associated with the severe episodic inflammatory skin disease known as generalized pustular psoriasis

    Onoufriadis, A., Simpson, M. A., Pink, A. E., Di Meglio, P., Smith, C. H., Pullabhatla, V., Knight, J., Spain, S. L., Nestle, F. O., Burden, A. D., Capon, F., Trembath, R. C. & Barker, J. N. W. N., 9/09/2011, In: American Journal of Human Genetics. 89, 3, p. 432-437 6 p.

    Research output: Contribution to journalJournal articlepeer-review

  7. Published

    Gene prioritization for imaging genetics studies using gene ontology and a stratified false discovery rate approach

    Patel, S., Park, M. T. M., Chakravarty, M. M., Knight, J. & Alzheimer's Disease Neuroimaging Initiative, 7/04/2016, In: Frontiers in Neuroinformatics. 10, 13 p., 14.

    Research output: Contribution to journalJournal articlepeer-review

  8. Published

    Heritability of hippocampal subfield volumes using a twin and non-twin siblings design

    Patel, S., Park, M. T. M., Devenyi, G. A., Patel, R., Masellis, M., Knight, J. & Chakravarty, M. M., 09/2017, In: Human Brain Mapping. 38, 9, p. 4337-4352 16 p.

    Research output: Contribution to journalJournal articlepeer-review

  9. Published

    Heritability estimates of cortical anatomy: The influence and reliability of different estimation strategies

    Patel, S., Patel, R., Park, M. T. M., Masellis, M., Knight, J. & Chakravarty, M. M., 09/2018, In: NeuroImage. 178, p. 78-91 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  10. Published

    Genome-wide association studies suggest limited immune gene enrichment in schizophrenia compared to 5 autoimmune diseases

    Pouget, J. G., Gonçalves, V. F., Spain, S. L., Finucane, H. K., Raychaudhuri, S., Kennedy, J. L., Knight, J. & Schizophrenia Working Group of the Psychiatric Genomics Consortium, 09/2016, In: Schizophrenia Bulletin. 42, 5, p. 1176-1184 9 p.

    Research output: Contribution to journalJournal articlepeer-review

  11. Published

    Investigation of TSPO variants in schizophrenia and antipsychotic treatment outcomes

    Pouget, J. G., Gonçalves, V. F., Nurmi, E. L., Laughlin, C. P., Mallya, K. S., McCracken, J. T., Aman, M. G., McDougle, C. J., Scahill, L., Misener, V. L., Tiwari, A. K., Zai, C. C., Brandl, E. J., Felsky, D., Leung, A. Q., Lieberman, J. A., Meltzer, H. Y., Potkin, S. G., Niedling, C., Steimer, W. & 4 others, Leucht, S., Knight, J., Müller, D. J. & Kennedy, J. L., 01/2015, In: Pharmacogenomics. 16, 1, p. 5-22 18 p.

    Research output: Contribution to journalJournal articlepeer-review

  12. Published

    Cross-disorder analysis of schizophrenia and 19 immune-mediated diseases identifies shared genetic risk

    Pouget, J. G., Han, B., Wu, Y., Mignot, E., Ollila, H. M., Barker, J., Spain, S., Dand, N., Trembath, R., Martin, J., Mayes, M. D., Bossini-Castillo, L., López-Isac, E., Jin, Y., Santorico, S. A., Spritz, R. A., Hakonarson, H., Polychronakos, C., Raychaudhuri, S., Knight, J. & 1 others, Schizophrenia Working Group of the Psychiatric Genomics Consortium, 15/10/2019, In: Human Molecular Genetics. 28, 20, p. 3498-3513 16 p.

    Research output: Contribution to journalJournal articlepeer-review

  13. Published

    Problematising Characteristicness: A Biomedical Association Case Study

    Prentice, S., Knight, J., Rayson, P., El-Haj, M. & Rutherford, N., 31/08/2021, In: International Journal of Corpus Linguistics. 26, 3, p. 305-335 31 p.

    Research output: Contribution to journalJournal articlepeer-review

  14. Forthcoming

    A Domain Based Approach to Semantic Lexicon Expansion

    Prentice, S., Rayson, P., Knight, J., El-Haj, M. & Elstein, S., 4/11/2021, (Accepted/In press) In: International Journal of Lexicography.

    Research output: Contribution to journalJournal articlepeer-review

  15. Published

    Pooled sequencing of 531 genes in inflammatory bowel disease identifies an associated rare variant in BTNL2 and implicates other immune related genes

    Prescott, N. J., Lehne, B., Stone, K., Lee, J. C., Taylor, K., Knight, J., Papouli, E., Mirza, M. M., Simpson, M. A., Spain, S. L., Lu, G., Fraternali, F., Bumpstead, S. J., Gray, E., Amar, A., Bye, H., Green, P., Chung-Faye, G., Hayee, BH., Pollok, R. & 10 others, Satsangi, J., Parkes, M., Barrett, J. C., Mansfield, J. C., Sanderson, J., Lewis, C. M., Weale, M. E., Schlitt, T., Mathew, C. G. & UK IBD Genetics Consortium, 11/02/2015, In: PLoS Genetics. 11, 2, e1004955.

    Research output: Contribution to journalJournal articlepeer-review

  16. Published

    Investigating the causal relationship of C-reactive protein with 32 complex somatic and psychiatric outcomes: a large-scale cross-consortium Mendelian randomization study

    Prins, B. P., Abbasi, A., Wong, A., Vaez, A., Nolte, I., Franceschini, N., Stuart, P. E., Guterriez Achury, J., Mistry, V., Bradfield, J. P., Valdes, A. M., Bras, J., Shatunov, A., Lu, C., Han, B., Raychaudhuri, S., Bevan, S., Mayes, M. D., Tsoi, L. C., Evangelou, E. & 28 others, Nair, R. P., Grant, S. F. A., Polychronakos, C., Radstake, T. R. D., van Heel, D. A., Dunstan, M. L., Wood, N. W., Al-Chalabi, A., Dehghan, A., Hakonarson, H., Markus, H. S., Elder, J. T., Knight, J., Arking, D. E., Spector, T. D., Koeleman, B. P. C., van Duijn, C. M., Martin, J., Morris, A. P., Weersma, R. K., Wijmenga, C., Munroe, P. B., Perry, J. R. B., Pouget, J. G., Jamshidi, Y., Snieder, H., Alizadeh, B. Z. & PAGE Consortium, 21/06/2016, In: PLoS Medicine. 13, 6, 29 p., e1001976.

    Research output: Contribution to journalJournal articlepeer-review

  17. Published

    Differential methylation of the X-chromosome is a possible source of discordance for bipolar disorder female monozygotic twins

    Rosa, A., Picchioni, M. M., Kalidindi, S., Loat, C. S., Knight, J., Toulopoulou, T., Vonk, R., van der Schot, A. C., Nolen, W., Kahn, R. S., McGuffin, P., Murray, R. M. & Craig, I. W., 5/06/2008, In: American Journal of Medical Genetics Part B: Neuropsychiatric Genetics . 147B, 4, p. 459-462 4 p.

    Research output: Contribution to journalJournal articlepeer-review

  18. Published

    APOE-ε4 associates with hippocampal volume, learning, and memory across the spectrum of Alzheimer's disease and dementia with Lewy bodies

    Saeed, U., Mirza, S. S., MacIntosh, B. J., Herrmann, N., Keith, J., Ramirez, J., Nestor, S. M., Yu, Q., Knight, J., Swardfager, W., Potkin, S. G., Rogaeva, E., George-Hyslop, P. S., Black, S. E. & Masellis, M., 09/2018, In: Alzheimer's and Dementia. 14, 9, p. 1137-1147 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  19. Published

    APOE-ɛ4, white matter hyperintensities, and cognition in Alzheimer and Lewy body dementia

    Saeed Mirza, S., Saeed, U., Knight, J., Ramirez, J., Stuss, D., Keith, J., Nestor, S. M., Yu, D., Swardfager, W., Rogaeva, E., George-Hyslop, P. S., Black, S. E. & Masellis, M., 5/11/2019, In: Neurology. 93, 19, p. e1807-e1819 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  20. Published

    Schizophrenia risk from complex variation of complement component 4

    Schizophrenia Working Group of the Psychiatric Genomics Consortium, 11/02/2016, In: Nature. 530, 7589, p. 177-183 7 p.

    Research output: Contribution to journalJournal articlepeer-review

  21. Published

    Haplotype association analysis of discrete and continuous traits using mixture of regression models

    Sham, P. C., Rijsdijk, F. V., Knight, J., Makoff, A., North, B. & Curtis, D., 03/2004, In: Behavior Genetics. 34, 2, p. 207-214 8 p.

    Research output: Contribution to journalJournal articlepeer-review

  22. Published

    Variants of the elongator protein 3 (ELP3) gene are associated with motor neuron degeneration

    Simpson, C. L., Lemmens, R., Miskiewicz, K., Broom, W. J., Hansen, V. K., van Vught, P. W. J., Landers, J. E., Sapp, P., Van Den Bosch, L., Knight, J., Neale, B. M., Turner, M. R., Veldink, J. H., Ophoff, R. A., Tripathi, V. B., Beleza, A., Shah, M. N., Proitsi, P., Van Hoecke, A., Carmeliet, P. & 10 others, Horvitz, H. R., Leigh, P. N., Shaw, C. E., van den Berg, L. H., Sham, P. C., Powell, J. F., Verstreken, P., Brown, R. H., Robberecht, W. & Al-Chalabi, A., 1/02/2009, In: Human Molecular Genetics. 18, 3, p. 472-481 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  23. Published

    A central resource for accurate allele frequency estimation from pooled DNA genotyped on DNA microarrays

    Simpson, C. L., Knight, J., Butcher, L. M., Hansen, V. K., Meaburn, E., Schalkwyk, L. C., Craig, I. W., Powell, J. F., Sham, P. C. & Al-Chalabi, A., 2005, In: Nucleic Acids Research. 33, 3, e25.

    Research output: Contribution to journalJournal articlepeer-review

  24. Published

    Genetic Markers of Human Evolution Are Enriched in Schizophrenia

    Schizophrenia Working Group of the Psychiatric Genomics Consortium, The International Headache Genetics Consortium, 15/08/2016, In: Biological Psychiatry. 80, 4, p. 284-92 9 p.

    Research output: Contribution to journalJournal articlepeer-review

  25. Published

    A genome-wide association study identifies new psoriasis susceptibility loci and an interaction between HLA-C and ERAP1

    Strange, A., Capon, F., Spencer, C. C. A., Knight, J., Weale, M. E., Allen, M. H., Barton, A., Band, G., Bellenguez, C., Bergboer, J. G. M., Blackwell, J. M., Bramon, E., Bumpstead, S. J., Casas, J. P., Cork, M. J., Corvin, A., Deloukas, P., Dilthey, A., Duncanson, A., Edkins, S. & 31 others, Estivill, X., Fitzgerald, O., Freeman, C., Giardina, E., Gray, E., Hofer, A., Hüffmeier, U., Hunt, S. E., Irvine, A. D., Jankowski, J., Kirby, B., Langford, C., Lascorz, J., Leman, J., Leslie, S., Mallbris, L., Markus, H. S., Mathew, C. G., McLean, W. H. I., McManus, R., Mössner, R., Moutsianas, L., Naluai, A. T., Nestle, F. O., Novelli, G., Onoufriadis, A., Palmer, C. N. A., Perricone, C., Pirinen, M., Plomin, R. & Genetic Analysis of Psoriasis Consortium & the Wellcome Trust Case Control Consortium 2, 11/2010, In: Nature Genetics. 42, 11, p. 985-990 6 p.

    Research output: Contribution to journalLetterpeer-review

  26. Published

    Genetic association analysis of N-methyl-d-aspartate receptor subunit gene GRIN2B and clinical response to clozapine

    Taylor, D. L., Tiwari, A. K., Lieberman, J. A., Potkin, S. G., Meltzer, H. Y., Knight, J., Remington, G., Müller, D. J. & Kennedy, J. L., 03/2016, In: Human Psychopharmacology: Clinical and Experimental. 31, 2, p. 121-134 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  27. Published

    Enhanced meta-analysis and replication studies identify five new psoriasis susceptibility loci

    Tsoi, L. C., Spain, S. L., Ellinghaus, E., Stuart, P. E., Capon, F., Knight, J., Tejasvi, T., Kang, H. M., Allen, M. H., Lambert, S., Stoll, S. W., Weidinger, S., Gudjonsson, J. E., Koks, S., Kingo, K., Esko, T., Das, S., Metspalu, A., Weichenthal, M., Enerback, C. & 13 others, Krueger, G. G., Voorhees, J. J., Chandran, V., Rosen, C. F., Rahman, P., Gladman, D. D., Reis, A., Nair, R. P., Franke, A., Barker, J. N. W. N., Abecasis, G. R., Trembath, R. C. & Elder, J. T., 5/05/2015, In: Nature Communications. 6, 8 p., 7001.

    Research output: Contribution to journalJournal articlepeer-review

  28. Published

    Identification of 15 new psoriasis susceptibility loci highlights the role of innate immunity

    Tsoi, L. C., Spain, S. L., Knight, J., Ellinghaus, E., Stuart, P. E., Capon, F., Ding, J., Li, Y., Tejasvi, T., Gudjonsson, J. E., Kang, H. M., Allen, M. H., McManus, R., Novelli, G., Samuelsson, L., Schalkwijk, J., Ståhle, M., Burden, A. D., Smith, C. H., Cork, M. J. & 31 others, Estivill, X., Bowcock, A. M., Krueger, G. G., Weger, W., Worthington, J., Tazi-Ahnini, R., Nestle, F. O., Hayday, A., Hoffmann, P., Winkelmann, J., Wijmenga, C., Langford, C., Edkins, S., Andrews, R., Blackburn, H., Strange, A., Band, G., Pearson, R. D., Vukcevic, D., Spencer, C. C. A., Deloukas, P., Mrowietz, U., Schreiber, S., Weidinger, S., Koks, S., Kingo, K., Esko, T., Metspalu, A., Lim, H. W., Voorhees, J. J. & Collaborative Association Study of Psoriasis (CASP), 12/2012, In: Nature Genetics. 44, 12, p. 1341-1348 8 p.

    Research output: Contribution to journalLetterpeer-review

  29. Published

    Common variants in DGKK are strongly associated with risk of hypospadias

    van der Zanden, L. F. M., van Rooij, I. A. L. M., Feitz, W. F. J., Knight, J., Donders, A. R. T., Renkema, K. Y., Bongers, E. M. H. F., Vermeulen, S. H. H. M., Kiemeney, L. A. L. M., Veltman, J. A., Arias-Vásquez, A., Zhang, X., Markljung, E., Qiao, L., Baskin, L. S., Nordenskjöld, A., Roeleveld, N., Franke, B. & Knoers, N. V. A. M., 01/2011, In: Nature Genetics. 43, 1, p. 48-50 3 p.

    Research output: Contribution to journalLetterpeer-review

  30. Published

    Application of multi-locus analytical methods to identify interacting loci in case-control studies

    Vermeulen, S. H. H. M., Den Heijer, M., Sham, P. C. & Knight, J., 09/2007, In: Annals of Human Genetics. 71, 5, p. 689-700 12 p.

    Research output: Contribution to journalJournal articlepeer-review

  31. Published

    Modeling linkage disequilibrium increases accuracy of polygenic risk scores

    Schizophrenia Working Group of the Psychiatric Genomics Consortium, Discovery, Biology, and Risk of Inherited Variants in Breast Cancer (DRIVE) study, 1/10/2015, In: American Journal of Human Genetics. 97, 4, p. 576-592 17 p.

    Research output: Contribution to journalJournal articlepeer-review

  32. Published

    Late-onset epilepsy predicts stroke: Systematic review and meta-analysis

    Wall, J., Knight, J. & Emsley, H. C. A., 1/02/2021, In: Epilepsy and Behavior. 115, 6 p., 107634.

    Research output: Contribution to journalReview articlepeer-review

  33. Published

    Leveraging Genomic Annotations and Pleiotropic Enrichment for Improved Replication Rates in Schizophrenia GWAS

    Bipolar Disorder and Schizophrenia Working Group of the Psychiatric Genomics Consortium, 01/2016, In: PLoS Genetics. 12, 1, 22 p., e1005803.

    Research output: Contribution to journalJournal articlepeer-review

  34. Published

    Genome-wide association analysis identifies novel blood pressure loci and offers biological insights into cardiovascular risk

    Warren, H. R., Evangelou, E., Cabrera, C. P., Gao, H., Ren, M., Mifsud, B., Ntalla, I., Surendran, P., Liu, C., Cook, J. P., Kraja, A. T., Drenos, F., Loh, M., Verweij, N., Marten, J., Karaman, I., Lepe, M. P. S., O'Reilly, P. F., Knight, J., Snieder, H. & 31 others, Kato, N., He, J., Tai, E. S., Said, M. A., Porteous, D., Alver, M., Poulter, N., Farrall, M., Gansevoort, R. T., Padmanabhan, S., Mägi, R., Stanton, A., Connell, J., Bakker, S. J. L., Metspalu, A., Shields, D. C., Thom, S., Brown, M., Sever, P., Esko, T., Hayward, C., van der Harst, P., Saleheen, D., Chowdhury, R., Chambers, J. C., Chasman, D. I., Chakravarti, A., Newton-Cheh, C., Lindgren, C. M., Levy, D. & International Consortium of Blood Pressure (ICBP) 1000G Analyses, 20/02/2017, In: Nature Genetics. 49, p. 403-415 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  35. Published

    CYP2A6 reduced activity gene variants confer reduction in lung cancer risk in African American smokers: findings from two independent populations

    Wassenaar, C. A., Ye, Y., Cai, Q., Aldrich, M. C., Knight, J., Spitz, M. R., Wu, X., Blot, W. J. & Tyndale, R. F., 01/2015, In: Carcinogenesis. 36, 1, p. 99-103 5 p.

    Research output: Contribution to journalJournal articlepeer-review

  36. Published

    Predictors of outcome in ulcerative colitis

    Waterman, M., Knight, J., Dinani, A., Xu, W., Stempak, J. M., Croitoru, K., Nguyen, G. C., Cohen, Z., McLeod, R. S., Greenberg, G. R., Steinhart, A. H. & Silverberg, M. S., 09/2015, In: Inflammatory Bowel Diseases. 21, 9, p. 2097-2105 9 p.

    Research output: Contribution to journalJournal articlepeer-review

  37. Published

    Can we accurately classify schizophrenia patients from healthy controls using magnetic resonance imaging and machine learning? A multi-method and multi-dataset study

    Winterburn, J. L., Voineskos, A. N., Devenyi, G. A., Plitman, E., de la Fuente-Sandoval, C., Bhagwat, N., Graff-Guerrero, A., Knight, J. & Chakravarty, M. M., 1/12/2019, In: Schizophrenia Research. 214, p. 3-10 8 p.

    Research output: Contribution to journalJournal articlepeer-review

  38. Published

    Genome-wide association study of bipolar disorder in Canadian and UK populations corroborates disease loci including SYNE1 and CSMD1

    Xu, W., Cohen-Woods, S., Chen, Q., Noor, A., Knight, J., Hosang, G., Parikh, S. V., De Luca, V., Tozzi, F., Muglia, P., Forte, J., McQuillin, A., Hu, P., Gurling, H. M. D., Kennedy, J. L., McGuffin, P., Farmer, A., Strauss, J. & Vincent, J. B., 4/01/2014, In: Journal of Medical Genetics. 15, 13 p., 2.

    Research output: Contribution to journalJournal articlepeer-review

  39. Published

    DNA pooling analysis of 21 norepinephrine transporter gene SNPs with attention deficit hyperactivity disorder: no evidence for association

    Xu, X., Knight, J., Brookes, K., Mill, J., Sham, P., Craig, I., Taylor, E. & Asherson, P., 5/04/2005, In: American Journal of Medical Genetics Part B: Neuropsychiatric Genetics . 134B, 1, p. 115-118 4 p.

    Research output: Contribution to journalJournal articlepeer-review

  40. Published

    The role of leptin, melanocortin, and neurotrophin system genes on body weight in anorexia nervosa and bulimia nervosa

    Yilmaz, Z., Kaplan, A. S., Tiwari, A. K., Levitan, R. D., Piran, S., Bergen, A. W., Kaye, W. H., Hakonarson, H., Wang, K., Berrettini, W. H., Brandt, H. A., Bulik, C. M., Crawford, S., Crow, S., Fichter, M. M., Halmi, K. A., Johnson, C. L., Keel, P. K., Klump, K. L., Magistretti, P. & 7 others, Mitchell, J., Strober, M., Thornton, L. M., Treasure, J., Woodside, D. B., Knight, J. & Kennedy, J. L., 08/2014, In: Journal of Psychiatric Research. 55, p. 77-86 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  41. Published

    A genome-wide association study of suicide severity scores in bipolar disorder

    Zai, C. C., Gonçalves, V. F., Tiwari, A. K., Gagliano, S. A., Hosang, G., de Luca, V., Shaikh, S. A., King, N., Chen, Q., Xu, W., Strauss, J., Breen, G., Lewis, C. M., Farmer, A. E., McGuffin, P., Knight, J., Vincent, J. B. & Kennedy, J. L., 06/2015, In: Journal of Psychiatric Research. 65, p. 23-29 7 p.

    Research output: Contribution to journalJournal articlepeer-review

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