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Professor Joanne Knight

Chair in Applied Data Science, Reader in Applied Data Science

  1. Published

    Genetic epistasis regulates amyloid deposition in resilient aging

    Felsky, D., Xu, J., Chibnik, L., Schneider, J., Knight, J., Kennedy, J. L., Bennett, D. A., De Jager, P. L. & Voineskos, A. N., 10/2017, In: Alzheimer's and Dementia. 13, 10, p. 1107-1116 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  2. Published

    Evidence that RNA editing modulates splice site selection in the 5-HT2C receptor gene

    Flomen, R., Knight, J., Sham, P., Kerwin, R. & Makoff, A., 1/04/2004, In: Nucleic Acids Research. 32, 7, p. 2113-2122 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  3. Published

    Age at onset in sod1-mediated amyotrophic lateral sclerosis shows familiality

    Fogh, I., Rijsdijk, F., Andersen, P. M., Sham, P. C., Knight, J., Neale, B., McKenna-Yasek, D., Silani, V., Brown, R. H., Powell, J. F. & Al-Chalabi, A., 08/2007, In: Neurogenetics. 8, 3, p. 235-236 2 p.

    Research output: Contribution to journalLetterpeer-review

  4. Published

    Genetic influences on schizophrenia and subcortical brain volumes: large-scale proof of concept

    Schizophrenia Working Group of the Psychiatric Genomics Consortium, 03/2016, In: Nature Reviews Neuroscience. 19, 3, p. 420-431 12 p.

    Research output: Contribution to journalJournal articlepeer-review

  5. Published

    Allele-skewed DNA modification in the brain: relevance to a schizophrenia GWAS

    Gagliano, S. A., Ptak, C., Mak, D. Y. F., Shamsi, M., Oh, G., Knight, J., Boutros, P. C. & Petronis, A., 5/05/2016, In: American Journal of Human Genetics. 98, 5, p. 956-962 7 p.

    Research output: Contribution to journalJournal articlepeer-review

  6. Published

    Smoking gun or circumstantial evidence? comparison of statistical learning methods using functional annotations for prioritizing risk variants

    Gagliano, S. A., Ravji, R., Barnes, M. R., Weale, M. E. & Knight, J., 24/08/2015, In: Scientific Reports. 5, 11 p., 13373.

    Research output: Contribution to journalJournal articlepeer-review

  7. Published

    Assessing models for genetic prediction of complex traits: a comparison of visualization and quantitative methods

    Gagliano, S. A., Paterson, A. D., Weale, M. E. & Knight, J., 22/05/2015, In: BMC Genomics. 16, 11 p., 405.

    Research output: Contribution to journalJournal articlepeer-review

  8. Published

    A Bayesian method to incorporate hundreds of functional characteristics with association evidence to improve variant prioritization

    Gagliano, S. A., Barnes, M. R., Weale, M. E. & Knight, J., 20/05/2014, In: PLoS ONE. 9, 5, 14 p., e98122.

    Research output: Contribution to journalJournal articlepeer-review

  9. Published

    Protein kinase cAMP-dependent regulatory type II beta (PRKAR2B) gene variants in antipsychotic-induced weight gain

    Gagliano, S. A., Tiwari, A. K., Freeman, N., Lieberman, J. A., Meltzer, H. Y., Kennedy, J. L., Knight, J. & Müller, D. J., 07/2014, In: Human Psychopharmacology: Clinical and Experimental. 29, 4, p. 330-335 6 p.

    Research output: Contribution to journalJournal articlepeer-review

  10. Published

    Genomics implicates adaptive and innate immunity in Alzheimer’s and Parkinson’s diseases

    Gagliano, S. A., Pouget, J. G., Hardy, J., Knight, J., Barnes, M. R., Ryten, M. & Weale, M., 12/2016, In: Annals of Clinical and Translational Neurology. 3, 12, p. 924-933 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  11. Published

    TTF-1 and RET promoter SNPs: regulation of RET transcription in Hirschsprung's disease

    Garcia-Barcelo, M., Ganster, R. W., Lui, V. C. H., Leon, T. Y. Y., So, M-T., Lau, A. M. F., Fu, M., Sham, M-H., Knight, J., Zannini, M. S., Sham, P. C. & Tam, P. K. H., 15/01/2005, In: Human Molecular Genetics. 14, 2, p. 191-204 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  12. Published

    Examining the role of common and rare mitochondrial variants in schizophrenia

    Gonçalves, V. F., Giamberardino, S. N., Crowley, J. J., Vawter, M. P., Saxena, R., Bulik, C. M., Yilmaz, Z., Hultman, C. M., Sklar, P., Kennedy, J. L., Sullivan, P. F. & Knight, J., 25/01/2018, In: PLoS ONE. 13, 1, e0191153.

    Research output: Contribution to journalJournal articlepeer-review

  13. Published

    Partitioning heritability of regulatory and cell-type-specific variants across 11 common diseases

    Schizophrenia Working Group of the Psychiatric Genomics Consortium, 6/11/2014, In: American Journal of Human Genetics. 95, 5, p. 535-552 18 p.

    Research output: Contribution to journalJournal articlepeer-review

  14. Published

    Transcriptome-wide association study of schizophrenia and chromatin activity yields mechanistic disease insights

    Schizophrenia Working Group of the Psychiatric Genomics Consortium, 04/2018, In: Nature Genetics. 50, 4, p. 538-548 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  15. Published

    Polymorphisms in the phosphate and tensin homolog gene are not associated with late-onset Alzheimer's disease

    Hamilton, G., Samedi, F., Knight, J., Archer, N., Foy, C., Walter, S., Turic, D., Jehu, L., Moore, P., Hollingworth, P., O'Donovan, M. C., Williams, J., Owen, M. J., Lovestone, S. & Powell, J. F., 19/06/2006, In: Neuroscience Letters. 401, 1-2, p. 77-80 4 p.

    Research output: Contribution to journalJournal articlepeer-review

  16. Published

    Endothelial nitric oxide gene haplotypes and risk of cerebral small-vessel disease

    Hassan, A. E. M., Gormley, K., O'Sullivan, M., Knight, J., Sham, P. C., Vallance, P., Bamford, J. & Markus, H. S., 03/2004, In: Stroke; a journal of cerebral circulation. 35, 3, p. 654-659 6 p.

    Research output: Contribution to journalJournal articlepeer-review

  17. Published

    Analyzing the Role of MicroRNAs in Schizophrenia in the Context of Common Genetic Risk Variants

    Schizophrenia Working Group of the Psychiatric Genomics Consortium, 04/2016, In: JAMA Psychiatry. 73, 4, p. 369-377 9 p.

    Research output: Contribution to journalJournal articlepeer-review

  18. Published

    Estimating Effect Sizes and Expected Replication Probabilities from GWAS Summary Statistics

    Schizophrenia Working Group of the Psychiatric Genomics Consortium, 16/02/2016, In: Frontiers in Genetics. 7, 13 p., 15.

    Research output: Contribution to journalJournal articlepeer-review

  19. Published

    Fine-mapping inflammatory bowel disease loci to single-variant resolution

    Huang, H., Fang, M., Jostins, L., Umićević Mirkov, M., Boucher, G., Anderson, C. A., Andersen, V., Cleynen, I., Cortes, A., Crins, F., D'Amato, M., Deffontaine, V., Dmitrieva, J., Docampo, E., Elansary, M., Farh, K. K-H., Franke, A., Gori, A-S., Goyette, P., Halfvarson, J. & 27 others, Haritunians, T., Knight, J., Lawrance, I. C., Lees, C. W., Louis, E., Mariman, R., Meuwissen, T., Mni, M., Momozawa, Y., Parkes, M., Spain, S. L., Théâtre, E., Trynka, G., Satsangi, J., van Sommeren, S., Vermeire, S., Xavier, R. J., Weersma, R. K., Duerr, R. H., Mathew, C. G., Rioux, J. D., McGovern, D. P. B., Cho, J. H., Georges, M., Daly, M. J., Barrett, J. C. & International Inflammatory Bowel Disease Genetics Consortium, 13/07/2017, In: Nature. 547, 7662, p. 173-178 6 p.

    Research output: Contribution to journalJournal articlepeer-review

  20. Published

    Are child health information services a viable source of accurate vaccination data for clinicians working in paediatric emergency departments in England?

    Isba, R., Davies, N. & Knight, J., 31/12/2021, In: BMJ health & care informatics. 28, 1, 3 p., e100486.

    Research output: Contribution to journalJournal articlepeer-review

  21. Published

    No Reliable Association between Runs of Homozygosity and Schizophrenia in a Well-Powered Replication Study

    Schizophrenia Working Group of the Psychiatric Genomics Consortium, 28/10/2016, In: PLoS Genetics. 12, 10, 20 p., e1006343.

    Research output: Contribution to journalJournal articlepeer-review

  22. Published

    A modelling framework for developing early warning systems of COPD emergency admissions

    Johnson, O., Knight, J. & Giorgi, E., 1/02/2021, In: Spatial and Spatio-temporal Epidemiology. 36, 9 p., 100392.

    Research output: Contribution to journalJournal articlepeer-review

  23. Published

    COVID-19 exposes the urgent need for coding of outpatient neurology episodes

    Kemp, M., Biggin, F., Dayanandan, R., Knight, J. & Emsley, H. C. A., 31/08/2020, In: BMJ Neurology Open. 2, 2, 2 p., e000080.

    Research output: Contribution to journalEditorialpeer-review

  24. Published

    IBD genetic risk profile in healthy first-degree relatives of Crohn's disease patients

    Kevans, D., Silverberg, M. S., Borowski, K., Griffiths, A., Xu, W., Onay, V., Paterson, A. D., Knight, J., Croitoru, K. & GEM Project, 02/2016, In: Journal of Crohn's and Colitis. 10, 2, p. 209-215 7 p.

    Research output: Contribution to journalJournal articlepeer-review

  25. Published

    Conditional analysis identifies three novel major histocompatibility complex loci associated with psoriasis

    Knight, J., Spain, S. L., Capon, F., Hayday, A., Nestle, F. O., Clop, A., Barker, J. N. W. N., Weale, M. E., Trembath, R. C. & Wellcome Trust Case Control Consortium, 1/12/2012, In: Human Molecular Genetics. 21, 23, p. 5185-5192 8 p.

    Research output: Contribution to journalJournal articlepeer-review

  26. Published

    Human chromosome 17 in essential hypertension

    Knight, J., Munroe, P. B., Pembroke, J. C. & Caulfield, M. J., 03/2003, In: Annals of Human Genetics. 67, 2, p. 193-206 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  27. Published

    Investigation of chromosome 17q as a locus for human essential hypertension in African Caribbeans

    Knight, J., Gardner, G. T., Clark, A. J. & Caulfield, M. J., 06/2000, In: Journal of Human Hypertension. 14, 6, p. 385-387 3 p.

    Research output: Contribution to journalJournal articlepeer-review

  28. Published

    CLUMPHAP: a simple tool for performing haplotype-based association analysis

    Knight, J., Curtis, D. & Sham, P. C., 09/2008, In: Genetic Epidemiology. 32, 6, p. 539-545 7 p.

    Research output: Contribution to journalJournal articlepeer-review

  29. Published

    Design and analysis of association studies using pooled DNA from large twin samples

    Knight, J. & Sham, P., 09/2006, In: Behavior Genetics. 36, 5, p. 665-677 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  30. Published

    Mapping loci influencing blood pressure in the Framingham pedigrees using model-free LOD score analysis of a quantitative trait

    Knight, J., North, B. V., Sham, P. C. & Curtis, D., 31/12/2003, In: Genetics. 4 , Suppl. 1, 4 p., S74.

    Research output: Contribution to journalJournal articlepeer-review

  31. Published

    Using functional annotation for the empirical determination of Bayes Factors for genome-wide association study analysis

    Knight, J., Barnes, M. R., Breen, G. & Weale, M. E., 27/04/2011, In: PLoS ONE. 6, 4, 8 p., e14808.

    Research output: Contribution to journalJournal articlepeer-review

  32. Published

    An investigation of candidate regions for association with bipolar disorder

    Knight, J., Rochberg, N. S., Saccone, S. F., Nurnberger, J. I., Rice, J. P. & NIMH Genetics Initiative Bipolar Disorder Consortium, 5/10/2010, In: American Journal of Medical Genetics Part B: Neuropsychiatric Genetics . 153B, 7, p. 1292-1297 6 p.

    Research output: Contribution to journalJournal articlepeer-review

  33. Published

    A comparison of association statistics between pooled and individual genotypes

    Knight, J., Saccone, S. F., Zhang, Z., Ballinger, D. G. & Rice, J. P., 03/2009, In: Human Heredity. 67, 4, p. 219-225 7 p.

    Research output: Contribution to journalJournal articlepeer-review

  34. Published

    A survey of current software for genetic power calculations

    Knight, J., 2/03/2004, In: BMC Genomics. 1, 3, p. 225-227 3 p.

    Research output: Contribution to journalJournal articlepeer-review

  35. Published

    Regional multi-locus association models

    Knight, J., Sham, P., Shaun, P. & Neale, B., 2007, Statistical genetics: gene mapping through linkage and association. Neale, B., Ferreira, M., Medland, S. & Posthuma, D. (eds.). London: Taylor and Francis

    Research output: Contribution in Book/Report/Proceedings - With ISBN/ISSNChapter

  36. Published

    Connected Health Cities – Lancaster – the north west coast and beyond

    Knight, J. & King, N. S., 23/04/2018, In: Morecambe Bay Medical Journal. 7, 12, p. 310-310 1 p.

    Research output: Contribution to journalJournal article

  37. Published

    Complex host genetics influence the microbiome in inflammatory bowel disease

    Knights, D., Silverberg, M. S., Weersma, R. K., Gevers, D., Dijkstra, G., Huang, H., Tyler, A. D., van Sommeren, S., Imhann, F., Stempak, J. M., Huang, H., Vangay, P., Al-Ghalith, G. A., Russell, C., Sauk, J., Knight, J., Daly, M. J., Huttenhower, C. & Xavier, R. J., 2/12/2014, In: Genome Biology. 6, 12, 11 p., 107.

    Research output: Contribution to journalJournal articlepeer-review

  38. E-pub ahead of print

    Accuracy and applications of sequencing and genotyping approaches for CYP2A6 and homologous genes

    Langlois, A. W. R., El-Boraie, A., Fukunaga, K., Mushiroda, T., Kubo, M., Lerman, C., Knight, J., Scherer, S. E., Chenoweth, M. J. & Tyndale, R. F., 21/02/2022, (E-pub ahead of print) In: Pharmacogenetics and genomics.

    Research output: Contribution to journalJournal articlepeer-review

  39. Published

    Identification of Gene Loci That Overlap Between Schizophrenia and Educational Attainment

    Schizophrenia Working Group of the Psychiatric Genomics Consortium, 26/06/2016, In: Schizophrenia Bulletin. 43, 3, p. 654-664 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  40. Published

    Introduction to genetic association studies

    Lewis, C. M. & Knight, J., 03/2012, In: Cold Spring Harbor Protocols. 2012, 3, p. 297-306 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  41. Published

    A molecule-based genetic association approach implicates a range of voltage-gated calcium channels associated with schizophrenia

    Schizophrenia Working Group of the Psychiatric Genomics Consortium, 06/2018, In: American Journal of Medical Genetics Part B: Neuropsychiatric Genetics . 177, 4, p. 454-467 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  42. Published

    Addiction-related genes in gambling disorders: new insights from parallel human and pre-clinical models

    Lobo, D. S. S., Aleksandrova, L., Knight, J., Casey, D. M., el-Guebaly, N., Nobrega, J. N. & Kennedy, J. L., 08/2015, In: Molecular Psychiatry. 20, 8, p. 1002-1010 9 p.

    Research output: Contribution to journalJournal articlepeer-review

  43. Published

    Contrasting genetic architectures of schizophrenia and other complex diseases using fast variance-components analysis

    Schizophrenia Working Group of Psychiatric Genomics Consortium, 12/2015, In: Nature Genetics. 47, 12, p. 1385-1392 8 p.

    Research output: Contribution to journalJournal articlepeer-review

  44. Published

    Dopamine D2 receptor gene variants and response to rasagiline in early Parkinson's disease: a pharmacogenetic study

    Masellis, M., Collinson, S., Freeman, N., Tampakeras, M., Levy, J., Tchelet, A., Eyal, E., Berkovich, E., Eliaz, R. E., Abler, V., Grossman, I., Fitzer-Attas, C., Tiwari, A., Hayden, M. R., Kennedy, J. L., Lang, A. E., Knight, J. & ADAGIO investigators, 07/2016, In: Brain. 139, 7, p. 2050-2062 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  45. Published

    Unraveling DNA sequence to identify cerebral indicators of dementia risk

    Masellis, M. & Knight, J., 16/01/2018, In: Neurology. 90, 3, p. 109 1 p.

    Research output: Contribution to journalComment/debate

  46. Published

    Whole genome linkage scan of recurrent depressive disorder from the depression network study

    McGuffin, P., Knight, J., Breen, G., Brewster, S., Boyd, P. R., Craddock, N., Gill, M., Korszun, A., Maier, W., Middleton, L., Mors, O., Owen, M. J., Perry, J., Preisig, M., Reich, T., Rice, J., Rietschel, M., Jones, L., Sham, P. & Farmer, A. E., 15/11/2005, In: Human Molecular Genetics. 14, 22, p. 3337-3345 9 p.

    Research output: Contribution to journalJournal articlepeer-review

  47. Published

    Homing in on depression genes

    McGuffin, P., Cohen, S. & Knight, J., 02/2007, In: American Journal of Psychiatry. 164, 2, p. 195-197 3 p.

    Research output: Contribution to journalEditorialpeer-review

  48. Published

    Genetic correlation between amyotrophic lateral sclerosis and schizophrenia

    Project MinE GWAS Consortium & Schizophrenia Working Group of the Psychiatric Genomics Consortium, 21/03/2017, In: Nature Communications. 8, 12 p., 14774.

    Research output: Contribution to journalJournal articlepeer-review

  49. Published

    Quantitative trait locus analysis of candidate gene alleles associated with attention deficit hyperactivity disorder (ADHD) in five genes: DRD4, DAT1, DRD5, SNAP-25, and 5HT1B

    Mill, J., Xu, X., Ronald, A., Curran, S., Price, T., Knight, J., Craig, I., Sham, P., Plomin, R. & Asherson, P., 5/02/2005, In: American Journal of Medical Genetics Part B: Neuropsychiatric Genetics . 133B, 1, p. 68-73 6 p.

    Research output: Contribution to journalJournal articlepeer-review

  50. Published

    Haplotype analysis of SNAP-25 suggests a role in the aetiology of ADHD

    Mill, J., Richards, S., Knight, J., Curran, S., Taylor, E. & Asherson, P., 08/2004, In: Molecular Psychiatry. 9, 8, p. 801-810 10 p.

    Research output: Contribution to journalJournal articlepeer-review

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