Home > Research > Researchers > Dr Jonathan Read > Publications

Dr Jonathan Read

Senior Lecturer in Biostatistics

  1. Published

    Rainfall Anomalies and Typhoid Fever in Blantyre, Malawi

    Gauld, J. S., Bilima, S., Diggle, P. J., Feasey, N. A. & Read, J. M., 10/05/2022, In: Epidemiology and Infection. 150, e122.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  2. Published

    Spatial and Genomic Data to Characterize Endemic Typhoid Transmission

    Gauld, J. S., Olgemoeller, F., Heinz, E., Nkhata, R., Bilima, S., Wailan, A. M., Kennedy, N., Mallewa, J., Gordon, M. A., Read, J. M., Heyderman, R. S., Thomson, N. R., Diggle, P. J. & Feasey, N. A., 1/06/2022, In: Clinical Infectious Diseases. 74, 11, p. 1993-2000 8 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  3. Published

    Participant perceptions and experiences of a novel community-based respiratory longitudinal sampling method in Liverpool, UK: A mixed methods feasibility study

    German, E. L., Nabwera, H. M., Robinson, R., Shiham, F., Liatsikos, K., Parry, C. M., McNamara, C., Kattera, S., Carter, K., Howard, A., Pojar, S., Hamilton, J., Matope, A., Read, J. M., Allen, S. J., Hill, H., Hawcutt, D. B., Urban, B. C., Collins, A. M., Ferreira, D. M., & 2 othersNikolaou, E. & Umer, M. F. (ed.), 9/11/2023, In: PLoS One. 18, 11, e0294133.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  4. Published

    Age-specific social mixing of school-aged children in a US setting using proximity detecting sensors and contact surveys

    Grantz, K. H., Cummings, D. A. T., Zimmer, S., Vukotich Jr, C., Galloway, D., Schweizer, M. L., Guclu, H., Cousins, J., Lingle, C., Yearwood, G. M. H., Li, K., Calderone, P., Noble, E., Gao, H., Rainey, J., Uzicanin, A. & Read, J. M., 27/01/2021, In: Scientific Reports. 11, 1, 11 p., 2319.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  5. Published

    Social contact networks and mixing among students in K-12 schools in Pittsburgh, PA

    Guclu, H., Read, J. M., Vukotich, C. J., Galloway, D. D., Gao, H., Rainey, J. J., Uzicanin, A., Zimmer, S. M. & Cummings, D. A. T., 15/03/2016, In: PLoS ONE. 11, 3, 19 p., e0151139.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  6. Published

    Differential mobility and local variation in infection attack rate

    Haw, D. J., Cummings, D. A. T., Lessler, J., Salje, H., Read, J. M. & Riley, S., 22/01/2019, In: PLoS Computational Biology. 15, 1, 16 p., e1006600.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  7. Published

    Strong spatial embedding of social networks generates nonstandard epidemic dynamics independent of degree distribution and clustering

    Haw, D. J., Pung, R., Read, J. M. & Riley, S., 22/09/2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 38, p. 23636-23642 7 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  8. Published

    Reconstructed influenza A/H3N2 infection histories reveal variation in incidence and antibody dynamics over the life course

    Hay, J. A., Zhu, H., Jiang, C. Q., Kwok, K. O., Shen, R., Kucharski, A., Yang, B., Read, J. M., Lessler, J., Cummings, D. A. T. & Riley, S., 5/04/2024, In: medRxiv : the preprint server for health sciences.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  9. Published

    Pneumococcal acquisition among infants exposed to HIV in rural Malawi: a longitudinal household study

    Heinsbroek, E., Tafatatha, T., Chisambo, C., Phiri, A., Mwiba, O., Ngwira, B., Crampin, A. C., Read, J. M. & French, N., 1/01/2016, In: American Journal of Epidemiology. 183, 1, p. 70-78 9 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  10. Published

    Persisting high prevalence of pneumococcal carriage among HIV-infected adults receiving antiretroviral therapy in Malawi: a cohort study

    Heinsbroek, E., Tafatatha, T., Phiri, A., Ngwira, B., Crampin, A. C., Read, J. M. & French, N., 10/09/2015, In: AIDS. 29, 14, p. 1837-1844 8 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  11. Published

    Pneumococcal carriage in households in Karonga District, Malawi, before and after introduction of 13-valent pneumococcal conjugate vaccination

    Heinsbroek, E., Tafatatha, T., Phiri, A., Swarthout, T. D., Alaerts, M., Crampin, A. C., Chisambo, C., Mwiba, O., Read, J. M. & French, N., 19/11/2018, In: Vaccine. 36, 48, p. 7369-7376 8 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  12. Published

    Determining the distance patterns in the movements of future doctors in UK between 2002 and 2015: a retrospective cohort study

    Hitchings, L., Fleet, B., Smith, D. T., Read, J. M., Melville, C. & Sedda, L., 1/03/2024, In: BMJ Open. 14, 3, e077635.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  13. Published

    Testing the hypothesis of preferential attachment in social network formation

    House, T., Read, J. M., Danon, L. & Keeling, M. J., 12/2015, In: EPJ Data Science. 4, 1, 13 p., 13.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  14. Published

    Modelling the impact of local reactive school closures on critical care provision during an influenza pandemic

    House, T., Baguelin, M., Van Hoek, A. J., White, P. J., Sadique, Z., Eames, K., Read, J. M., Hens, N., Melegaro, A., Edmunds, W. J. & Keeling, M. J., 22/09/2011, In: Proceedings of the Royal Society B: Biological Sciences. 278, 1719, p. 2753-2760 8 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  15. Published

    Case series of severe neurologic sequelae of ebola virus disease during epidemic, Sierra Leone

    Howlett, P. J., Walder, A. R., Lisk, D. R., Fitzgerald, F., Sevalie, S., Lado, M., N’Jai, A., Brown, C. S., Sahr, F., Sesay, F., Read, J. M., Steptoe, P. J., Beare, N. A. V., Dwivedi, R., Solbrig, M., Deen, G. F., Solomon, T., Semple, M. G. & Scott, J. T., 24/08/2018, In: Emerging Infectious Diseases. 24, 8, p. 1412-1421 10 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  16. Published

    Early impact of rotavirus vaccination in a large paediatric hospital in the UK

    Hungerford, D., Read, J. M., Cooke, R. P. D., Vivancos, R., Iturriza-Gómara, M., Allen, D. J., French, N. & Cunliffe, N., 06/2016, In: Journal of Hospital Infection. 93, 2, p. 117-120 4 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  17. Published

    In-season and out-of-season variation of rotavirus genotype distribution and age of infection across 12 European countries before the introduction of routine vaccination, 2007/08 to 2012/13

    Hungerford, D., Vivancos, R., Read, J. M., Pitzer, V. E., Cunliffe, N., French, N., Iturriza-Gómara, M. & EuroRotaNet network members, 14/01/2016, In: Eurosurveillance. 21, 2, 12 p., 5.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  18. Published

    Rotavirus vaccine impact and socioeconomic deprivation: an interrupted time-series analysis of gastrointestinal disease outcomes across primary and secondary care in the UK

    Hungerford, D., Vivancos, R., Read, J. M., Iturriza-Gόmara, M., French, N. & Cunliffe, N. A., 29/01/2018, In: BMC Medicine. 16, 1, 10 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  19. Published

    Mitigating bias in observational vaccine effectiveness studies using simulated comparator populations: Application to rotavirus vaccination in the UK

    Hungerford, D., Vivancos, R., Read, J. M., Bonnett, L. J., Bar-Zeev, N., Iturriza-Gómara, M., Cunliffe, N. A. & French, N., 29/10/2018, In: Vaccine. 36, 45, p. 6674-6682 9 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  20. Published

    Reduction in hospitalisations for acute gastroenteritis-associated childhood seizures since introduction of rotavirus vaccination: A time-series and change-point analysis of hospital admissions in England

    Hungerford, D. J., French, N., Iturriza-Gómara, M., Read, J. M., Cunliffe, N. A. & Vivancos, R., 1/11/2019, In: Journal of Epidemiology and Community Health. p. 1020-1025 6 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  21. Published

    Prospective cohort study to investigate the burden and transmission of acute gastroenteritis in care homes: a study protocol

    Inns, T., Pulawska-Czub, A., Harris, J. P., Vivancos, R., Read, J. M., Beeching, N. J., Allen, D. J., Iturriza-Gomara, M. & O'Brien, S. J., 1/11/2017, In: BMJ Open. 7, 11, 7 p., e018867.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  22. Published

    Effectiveness of infection prevention and control interventions, excluding personal protective equipment, to prevent nosocomial transmission of SARS-CoV-2: a systematic review and call for action

    Jafari, Y., Yin, M., Lim, C., Pople, D., Evans, S., Stimson, J., Pham, T. M., Read, J. M., Robotham, J. V., Cooper, B. S., Knight, G. M. & group, LSHTM. CMMID. COVID. W., 1/03/2022, In: Infection Prevention in Practice. 4, 1, 12 p., 100192.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  23. Published

    Cohort Profile: a study of influenza immunity in the urban and rural Guangzhou region of China: the Fluscape Study

    Jiang, C. Q., Lessler, J., Kim, L., Kwok, K. O., Read, J. M., Wang, S., Tan, L., Hast, M., Zhu, H., Guan, Y., Riley, S. & Cummings, D. A. T., 04/2017, In: International Journal of Epidemiology. 46, 2, 7 p., e16.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  24. Published

    The invasion and coexistence of competing Wolbachia strains

    Keeling, M. J., Jiggins, F. M. & Read, J. M., 10/2003, In: Heredity. 91, 4, p. 382-388 7 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  25. Published

    Efficacy of contact tracing for the containment of the 2019 novel coronavirus (COVID-19)

    Keeling, M. J., Hollingsworth, T. D. & Read, J. M., 8/09/2020, In: Journal of Epidemiology and Community Health. 74, 10, p. 861-866 6 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

Back to top