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Dr Jonathan Read

Senior Lecturer in Biostatistics

  1. Published

    Networks in epidemiology

    Eames, K. T. D. & Read, J. M., 2008, Bio-inspired computing and communication: First Workshop on Bio-Inspired Design of Networks, BIOWIRE 2007 Cambridge, UK, April 2-5, 2007 Revised Selected Papers. Lio, P., Yoneki, E., Crowcroft, J. & Verma, D. C. (eds.). Berlin: Springer Verlag, p. 79-90 12 p. (Lecture Notes in Computer Science; vol. 5151).

    Research output: Contribution in Book/Report/Proceedings - With ISBN/ISSNConference contribution/Paperpeer-review

  2. Published

    Novel coronavirus 2019-nCoV (COVID-19): Early estimation of epidemiological parameters and epidemic size estimates

    Read, J. M., Bridgen, J. R. E., Cummings, D. A. T., Ho, A. & Jewell, C. P., 19/07/2021, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 376, 1829, 9 p., 20200265.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  3. Published

    Participant perceptions and experiences of a novel community-based respiratory longitudinal sampling method in Liverpool, UK: A mixed methods feasibility study

    German, E. L., Nabwera, H. M., Robinson, R., Shiham, F., Liatsikos, K., Parry, C. M., McNamara, C., Kattera, S., Carter, K., Howard, A., Pojar, S., Hamilton, J., Matope, A., Read, J. M., Allen, S. J., Hill, H., Hawcutt, D. B., Urban, B. C., Collins, A. M., Ferreira, D. M., & 2 othersNikolaou, E. & Umer, M. F. (ed.), 9/11/2023, In: PLoS One. 18, 11, e0294133.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  4. Published

    Patterns of human social contact and contact with animals in Shanghai, China

    Zhang, J., Klepac, P., Read, J., Rosello, A., Wang, X., Lai, S., Li, M., Song, Y., Wei, Q., Jiang, H., Yang, J., Lynn, H., Flasche, S., Jit, M. & Yu, H., 22/10/2019, In: Scientific Reports. 9, 11 p., 15141.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  5. Published

    Persisting high prevalence of pneumococcal carriage among HIV-infected adults receiving antiretroviral therapy in Malawi: a cohort study

    Heinsbroek, E., Tafatatha, T., Phiri, A., Ngwira, B., Crampin, A. C., Read, J. M. & French, N., 10/09/2015, In: AIDS. 29, 14, p. 1837-1844 8 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  6. Published

    Pneumococcal acquisition among infants exposed to HIV in rural Malawi: a longitudinal household study

    Heinsbroek, E., Tafatatha, T., Chisambo, C., Phiri, A., Mwiba, O., Ngwira, B., Crampin, A. C., Read, J. M. & French, N., 1/01/2016, In: American Journal of Epidemiology. 183, 1, p. 70-78 9 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  7. Published

    Pneumococcal carriage in households in Karonga District, Malawi, before and after introduction of 13-valent pneumococcal conjugate vaccination

    Heinsbroek, E., Tafatatha, T., Phiri, A., Swarthout, T. D., Alaerts, M., Crampin, A. C., Chisambo, C., Mwiba, O., Read, J. M. & French, N., 19/11/2018, In: Vaccine. 36, 48, p. 7369-7376 8 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  8. Published

    Predicting virologically confirmed influenza using school absences in Allegheny County, Pennsylvania, USA during the 2007-2015 influenza seasons

    Quandelacy, T. M., Zimmer, S., Lessler, J., Vukotich, C., Bieltz, R., Grantz, K. H., Galloway, D., Read, J. M., Zheteyeva, Y., Gao, H., Uzicanin, A. & Cummings, D. A. T., 30/11/2021, In: Influenza and Other Respiratory Viruses. 15, 6, p. 757-766 10 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  9. Published

    Prevalence and risk factors of community-associated methicillin-resistant carriage in Asia-Pacific region from 2000 to 2016: a systematic review and meta-analysis

    Wong, J. W., Ip, M., Tang, A., Wei, V. W., Wong, S. Y., Riley, S., Read, J. M. & Kwok, K. O., 12/10/2018, In: Clinical Epidemiology. 10, p. 1489-1501 13 p.

    Research output: Contribution to Journal/MagazineReview articlepeer-review

  10. Published

    Prevalence and risk factors of community-associated methicillin-resistant Staphylococcus aureus (CA-MRSA) carriage in Asia-Pacific region from 2000 to 2016: A systematic review and meta-analysis

    Wong, J., Ip, M., Tang, A., Wei, V., Wong, S., Riley, S., Read, J. M. & Kwok, K. O., 08/2018, In: International Journal of Infectious Diseases. 73, Suppl., p. 135-136 2 p.

    Research output: Contribution to Journal/MagazineMeeting abstractpeer-review

  11. Published

    Prevalence of endemic respiratory viruses during the COVID-19 pandemic in urban and rural Malawi

    Vink, E., Banda, L., Amoah, A. S., Kasenda, S., Read, J. M., Jewell, C., Denis, B., Mwale, A. C., Crampin, A., Anscombe, C., Menyere, M. & Ho, A., 29/02/2024, In: Open Forum Infectious Diseases. 11, 2, p. ofad643

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  12. Published

    Primary Care Influenza-like Illness Surveillance in Ho Chi Minh City, Vietnam 2013-2015

    Todd, S., Huong, N. T. C., Thanh, N. T. L., Vy, N. H. T., Hung, N. T., Thao, T. T. N., Phuong, H. T., van Doorn, H. R., Hang, V. T. T., Chau, N. V. V., Read, J. M., Lalloo, D. G. & Boni, M. F., 09/2018, In: Influenza and Other Respiratory Viruses. 12, 5, p. 623-631 9 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  13. Published

    Prospective cohort study to investigate the burden and transmission of acute gastroenteritis in care homes: a study protocol

    Inns, T., Pulawska-Czub, A., Harris, J. P., Vivancos, R., Read, J. M., Beeching, N. J., Allen, D. J., Iturriza-Gomara, M. & O'Brien, S. J., 1/11/2017, In: BMJ Open. 7, 11, 7 p., e018867.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  14. Published

    Rainfall Anomalies and Typhoid Fever in Blantyre, Malawi

    Gauld, J. S., Bilima, S., Diggle, P. J., Feasey, N. A. & Read, J. M., 10/05/2022, In: Epidemiology and Infection. 150, e122.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  15. Published

    Reconstructed influenza A/H3N2 infection histories reveal variation in incidence and antibody dynamics over the life course

    Hay, J. A., Zhu, H., Jiang, C. Q., Kwok, K. O., Shen, R., Kucharski, A., Yang, B., Read, J. M., Lessler, J., Cummings, D. A. T. & Riley, S., 5/04/2024, In: medRxiv : the preprint server for health sciences.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  16. Published

    Reconstructing unseen transmission events to infer dengue dynamics from viral sequences

    Salje, H., Wesolowski, A., Brown, T. S., Kiang, M. V., Berry, I. M., Lefrancq, N., Fernandez, S., Jarman, R. G., Ruchusatsawat, K., Iamsirithaworn, S., Vandepitte, W. P., Suntarattiwong, P., Read, J. M., Klungthong, C., Thaisomboonsuk, B., Engø-Monsen, K., Buckee, C., Cauchemez, S. & Cummings, D. A. T., 22/03/2021, In: Nature Communications. 12, 1, 10 p., 1810.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  17. Published

    Reduction in hospitalisations for acute gastroenteritis-associated childhood seizures since introduction of rotavirus vaccination: A time-series and change-point analysis of hospital admissions in England

    Hungerford, D. J., French, N., Iturriza-Gómara, M., Read, J. M., Cunliffe, N. A. & Vivancos, R., 1/11/2019, In: Journal of Epidemiology and Community Health. p. 1020-1025 6 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  18. Published

    Risk factors for UK Plasmodium falciparum cases

    Pinsent, A., Read, J. M., Griffin, J. T., Smith, V., Gething, P. W., Ghani, A. C., Pasvol, G. & Hollingsworth, T. D., 4/08/2014, In: Malaria Journal. 13, 8 p., 298.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  19. Published

    Risk of mortality in patients infected with SARS-CoV-2 variant of concern 202012/1: Matched cohort study

    Challen, R., Brooks-Pollock, E., Read, J. M., Dyson, L., Tsaneva-Atanasova, K. & Danon, L., 10/03/2021, In: BMJ. 372, 10 p., 579.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  20. Published

    Rotavirus vaccine impact and socioeconomic deprivation: an interrupted time-series analysis of gastrointestinal disease outcomes across primary and secondary care in the UK

    Hungerford, D., Vivancos, R., Read, J. M., Iturriza-Gόmara, M., French, N. & Cunliffe, N. A., 29/01/2018, In: BMC Medicine. 16, 1, 10 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  21. Published

    Social contact networks and mixing among students in K-12 schools in Pittsburgh, PA

    Guclu, H., Read, J. M., Vukotich, C. J., Galloway, D. D., Gao, H., Rainey, J. J., Uzicanin, A., Zimmer, S. M. & Cummings, D. A. T., 15/03/2016, In: PLoS ONE. 11, 3, 19 p., e0151139.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  22. Published

    Social contacts and the locations in which they occur as risk factors for influenza infection

    Kwok, K. O., Cowling, B. J., Wei, V. W. I., Wu, K. M., Read, J. M., Lessler, J., Cummings, D. A., Peiris, J. S. M. & Riley, S., 22/08/2014, In: Proceedings of the Royal Society B: Biological Sciences. 281, 1789, 9 p., 20140709.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  23. Published

    Social encounter networks: characterizing Great Britain

    Danon, L., Read, J. M., House, T. A., Vernon, M. C. & Keeling, M. J., 22/08/2013, In: Proceedings of the Royal Society B: Biological Sciences. 280, 1765, 10 p., 20131037.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  24. Published

    Social encounter networks: collective properties and disease transmission

    Danon, L., House, T. A., Read, J. M. & Keeling, M. J., 7/11/2012, In: Interface. 9, 76, p. 2826-2833 8 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  25. Published

    Social mixing patterns in rural and urban areas of southern China

    Read, J. M., Lessler, J., Riley, S., Wang, S., Tan, L. J., Kwok, K. O., Guan, Y., Jiang, C. Q. & Cummings, D. A. T., 22/06/2014, In: Proceedings of the Royal Society B: Biological Sciences. 281, 1785, 8 p., 20140268.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

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