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Dr Jonathan Read

Senior Lecturer in Biostatistics

  1. Review article
  2. Published

    Prevalence and risk factors of community-associated methicillin-resistant carriage in Asia-Pacific region from 2000 to 2016: a systematic review and meta-analysis

    Wong, J. W., Ip, M., Tang, A., Wei, V. W., Wong, S. Y., Riley, S., Read, J. M. & Kwok, K. O., 12/10/2018, In: Clinical Epidemiology. 10, p. 1489-1501 13 p.

    Research output: Contribution to Journal/MagazineReview articlepeer-review

  3. Meeting abstract
  4. Published

    Prevalence and risk factors of community-associated methicillin-resistant Staphylococcus aureus (CA-MRSA) carriage in Asia-Pacific region from 2000 to 2016: A systematic review and meta-analysis

    Wong, J., Ip, M., Tang, A., Wei, V., Wong, S., Riley, S., Read, J. M. & Kwok, K. O., 08/2018, In: International Journal of Infectious Diseases. 73, Suppl., p. 135-136 2 p.

    Research output: Contribution to Journal/MagazineMeeting abstractpeer-review

  5. Published

    Design of a study to examine contact mixing and acute respiratory infection in Ballabgarh, Haryana

    Kumar, S., Amarchand, R., Gosain, M., Sharma, H., Dawood, F., Jain, S., Lafond, K., Widdowson, M-A., Read, J. M. & Krishnan, A., 04/2016, In: International Journal of Infectious Diseases. 45, Suppl. 1, p. 282 1 p.

    Research output: Contribution to Journal/MagazineMeeting abstract

  6. Published

    The use of satellite imagery in contact/travel questionnaires

    Lessler, J., Read, J. M., Riley, S. R. & Cummings, D. A. T., 1/06/2009, In: American Journal of Epidemiology. 169, Suppl. 11, p. S59-S59 1 p., 236.

    Research output: Contribution to Journal/MagazineMeeting abstractpeer-review

  7. Literature review
  8. Published

    Close encounters of the infectious kind: methods to measure social mixing behaviour

    Read, J. M., Edmunds, W. J., Riley, S., Lessler, J. & Cummings, D. A. T., 12/2012, In: Epidemiology and Infection. 140, 12, p. 2117-2130 14 p.

    Research output: Contribution to Journal/MagazineLiterature reviewpeer-review

  9. Letter
  10. Published

    Hospital-acquired SARS-CoV-2 infection in the UK's first COVID-19 pandemic wave

    Read, J., Green, C., Harrison, E., Docherty, A., Funk, S., Harrison, J., Girvan, M., Hardwick, H., Dunning, J., Nguyen-Van-Tam, J., Openshaw, P., Baillie, K. & Semple, M., 18/09/2021, In: The Lancet. 398, 10305, p. 1037-1038 2 p.

    Research output: Contribution to Journal/MagazineLetterpeer-review

  11. Journal article
  12. Published

    Reconstructed influenza A/H3N2 infection histories reveal variation in incidence and antibody dynamics over the life course

    Hay, J. A., Zhu, H., Jiang, C. Q., Kwok, K. O., Shen, R., Kucharski, A., Yang, B., Read, J. M., Lessler, J., Cummings, D. A. T. & Riley, S., 5/04/2024, In: medRxiv : the preprint server for health sciences.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  13. Published

    A Bayesian approach to identifying the role of hospital structure and staff interactions in nosocomial transmission of SARS-CoV-2

    Bridgen, J. R. E., Lewis, J. M., Todd, S., Taegtmeyer, M., Read, J. M. & Jewell, C. P., 31/03/2024, In: Interface. 21, 212, 20230525.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  14. Published

    The national distribution of lymphatic filariasis cases in Malawi using patient mapping and geostatistical modelling

    Barrett, C., Chiphwanya, J., Mkwanda, S., Matipula, D. E., Ndhlovu, P., Chaponda, L., Turner, J. D., Giorgi, E., Betts, H., Martindale, S., Taylor, M. J. & Read, J., 25/03/2024, In: PLoS Neglected Tropical Diseases. e0012056.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  15. Published

    Determining the distance patterns in the movements of future doctors in UK between 2002 and 2015: a retrospective cohort study

    Hitchings, L., Fleet, B., Smith, D. T., Read, J. M., Melville, C. & Sedda, L., 1/03/2024, In: BMJ Open. 14, 3, e077635.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  16. Published

    Prevalence of endemic respiratory viruses during the COVID-19 pandemic in urban and rural Malawi

    Vink, E., Banda, L., Amoah, A. S., Kasenda, S., Read, J. M., Jewell, C., Denis, B., Mwale, A. C., Crampin, A., Anscombe, C., Menyere, M. & Ho, A., 29/02/2024, In: Open Forum Infectious Diseases. 11, 2, p. ofad643

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  17. E-pub ahead of print

    Epidemiology of Human Seasonal Coronaviruses Among People With Mild and Severe Acute Respiratory Illness in Blantyre, Malawi, 2011-2017

    Kovacs, D., Mambule, I., Read, J. M., Kiran, A., Chilombe, M., Bvumbwe, T., Aston, S., Menyere, M., Masina, M., Kamzati, M., Ganiza, T. N., Iuliano, D., McMorrow, M., Bar-Zeev, N., Everett, D., French, N. & Ho, A., 14/02/2024, (E-pub ahead of print) In: The Journal of infectious diseases.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  18. Published

    Mental health conditions in people affected by filarial lymphoedema in Malawi: prevalence, associated risk factors and the impact of an enhanced self-care intervention

    Barrett, C., Chiphwanya, J., Chaponda, L., Matipula, D. E., Turner, J. D., Taylor, M. J., Read, J. M. & Kelly-Hope, L. A., 20/12/2023, In: International Health. 15, Supplement_3, p. iii14-iii27

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  19. Published

    Characterizing the evolving SARS-CoV-2 seroprevalence in urban and rural Malawi between February 2021 and April 2022: a population-based cohort study

    Banda, L., Ho, A., Kasenda, S., Read, J. M., Jewell, C., Price, A., McLean, E., Dube, A., Chaima, D., Samikwa, L., Nyirenda, T. S., Hughes, E. C., Willett, B. J., Mwale, A. C., Amoah, A. S. & Crampin, A., 1/12/2023, In: International Journal of Infectious Diseases. 137, p. 118-125 8 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  20. Published

    Participant perceptions and experiences of a novel community-based respiratory longitudinal sampling method in Liverpool, UK: A mixed methods feasibility study

    German, E. L., Nabwera, H. M., Robinson, R., Shiham, F., Liatsikos, K., Parry, C. M., McNamara, C., Kattera, S., Carter, K., Howard, A., Pojar, S., Hamilton, J., Matope, A., Read, J. M., Allen, S. J., Hill, H., Hawcutt, D. B., Urban, B. C., Collins, A. M., Ferreira, D. M., & 2 othersNikolaou, E. & Umer, M. F. (ed.), 9/11/2023, In: PLoS One. 18, 11, e0294133.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  21. Published

    The burden and dynamics of hospital-acquired SARS-CoV-2 in England

    Cooper, B. S., Evans, S., Jafari, Y., Pham, T. M., Mo, Y., Lim, C., Pritchard, M. G., Pople, D., Hall, V., Stimson, J., Eyre, D. W., Read, J. M., Donnelly, C. A., Horby, P., Watson, C., Funk, S., Robotham, J. V. & Knight, G. M., 2/11/2023, In: Nature. 623, 7985, p. 132-138 7 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  22. Published

    Assessing the use of minimally invasive self-sampling at home for long-term monitoring of the microbiota within UK families

    Nikolaou, E., German, E. L., Howard, A., Nabwera, H. M., Matope, A., Robinson, R., Shiham, F., Liatsikos, K., McNamara, C., Kattera, S., Carter, K., Parry, C. M., Read, J. M., Allen, S. J., Urban, B. C., Hawcutt, D. B., Hill, H., Collins, A. M. & Ferreira, D. M., 24/10/2023, In: Scientific Reports. 13, 1, 18201.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  23. Published

    Strengthening quality in sexual, reproductive, maternal, and newborn health systems in low- and middle-income countries through midwives and facility mentoring: an integrative review

    Anderson, R., Zaman, S. B., Jimmy, A. N., Read, J. M. & Limmer, M., 5/10/2023, In: BMC Pregnancy and Childbirth. 23, 1, 712.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  24. Published

    Contact patterns of UK home delivery drivers and their use of protective measures during the COVID-19 pandemic: a cross-sectional study

    Bridgen, J. R. E., Wei, H., Whitfield, C., Han, Y., Hall, I., Jewell, C. P., van Tongeren, M. J. A. & Read, J. M., 30/06/2023, In: Occupational and Environmental Medicine. 80, 6, p. 333-338 6 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  25. Published

    Household transmission dynamics of seasonal human coronaviruses

    Quandelacy, T. M., Hitchings, M. D. T., Lessler, J., Read, J. M., Vukotich, C., Azman, A. S., Salje, H., Zimmer, S., Gao, H., Zheteyeva, Y., Uzicanin, A. & Cummings, D. A. T., 1/05/2023, In: The Journal of infectious diseases. 227, 9, p. 1104-1112 9 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  26. Published

    Coughs, colds and “freshers’ flu” survey in the University of Cambridge, 2007–2008

    Eames, K. T. D., Tang, M. L., Hill, E. M., Tildesley, M. J., Read, J. M., Keeling, M. J. & Gog, J. R., 31/03/2023, In: Epidemics. 42, 15 p., 100659.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  27. Published

    Long term intrinsic cycling in human life course antibody responses to influenza A(H3N2): an observational and modeling study

    Yang, B., García-Carreras, B., Lessler, J., Read, J. M., Zhu, H., Metcalf, C. J. E., Hay, J. A., Kwok, K. O., Shen, R., Jiang, C. Q., Guan, Y., Riley, S. & Cummings, D. A., 16/12/2022, In: eLife. 11, e81457.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  28. Published

    Social mixing patterns in the UK following the relaxation of COVID-19 pandemic restrictions, July to August 2020: a cross-sectional online survey

    Bridgen, J., Jewell, C. & Read, J., 13/12/2022, In: BMJ Open. 12, 12, 8 p., e059231.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  29. E-pub ahead of print

    Efficient Bayesian inference of instantaneous reproduction numbers at fine spatial scales, with an application to mapping and nowcasting the Covid‐19 epidemic in British local authorities

    Teh, Y. W., Elesedy, B., He, B., Hutchinson, M., Zaidi, S., Bhoopchand, A., Paquet, U., Tomasev, N., Read, J. & Diggle, P. J., 8/12/2022, (E-pub ahead of print) In: Journal of the Royal Statistical Society: Series A Statistics in Society.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

  30. Published

    Estimation of reproduction numbers in real time: Conceptual and statistical challenges

    JUNIPER Consortium, 30/11/2022, In: Journal of the Royal Statistical Society: Series A Statistics in Society. 185, 51, p. S112-S130 19 p.

    Research output: Contribution to Journal/MagazineJournal articlepeer-review

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