[2021-02-15 10:46:12,972] multiqc [DEBUG ] No MultiQC config found: /data/Bioinformatics_Softwere/Miniconda/.conda/envs/multiqc/lib/python3.6/site-packages/multiqc_config.yaml [2021-02-15 10:46:12,972] multiqc [DEBUG ] No MultiQC config found: /home/hatim/.multiqc_config.yaml [2021-02-15 10:46:12,973] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2021-02-15 10:46:12,973] multiqc [DEBUG ] Command used: /home/hatim/data/Bioinformatics_Softwere/Miniconda/.conda/envs/multiqc/bin/multiqc . [2021-02-15 10:46:13,079] multiqc [DEBUG ] Latest MultiQC version is v1.9 [2021-02-15 10:46:13,079] multiqc [INFO ] This is MultiQC v1.9 [2021-02-15 10:46:13,079] multiqc [DEBUG ] Command : /home/hatim/data/Bioinformatics_Softwere/Miniconda/.conda/envs/multiqc/bin/multiqc . [2021-02-15 10:46:13,079] multiqc [DEBUG ] Working dir : /data/Experments/E_37_SRA_Submission/Reads/GH005 [2021-02-15 10:46:13,079] multiqc [INFO ] Template : default [2021-02-15 10:46:13,080] multiqc [DEBUG ] Running Python 3.6.12 | packaged by conda-forge | (default, Dec 9 2020, 00:36:02) [GCC 9.3.0] [2021-02-15 10:46:13,080] multiqc [INFO ] Searching : /data/Experments/E_37_SRA_Submission/Reads/GH005 [2021-02-15 10:46:13,080] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2021-02-15 10:46:13,080] multiqc [DEBUG ] Using temporary directory for creating report: /tmp/tmpjlrq4fd3 [2021-02-15 10:46:13,285] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: GH005_161219.fastq [2021-02-15 10:46:13,285] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: GH005_aber19_300_1.fq [2021-02-15 10:46:13,424] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GH005_BGI19_270_1_fastqc.html [2021-02-15 10:46:13,478] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GH005_BGI19_270_1_fastqc.html [2021-02-15 10:46:13,479] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: GH005_BGI19_270_1_fastqc.html [2021-02-15 10:46:13,479] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: GH005_BGI19_270_1_fastqc.html [2021-02-15 10:46:13,479] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: GH005_BGI19_270_1_fastqc.html [2021-02-15 10:46:13,479] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: GH005_BGI19_270_1_fastqc.html [2021-02-15 10:46:13,479] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: GH005_BGI19_270_1_fastqc.html [2021-02-15 10:46:13,484] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: GH005_BGI19_270_1_fastqc.html [2021-02-15 10:46:13,796] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: GH005_BGI13_500_1.fq [2021-02-15 10:46:13,911] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GH005_BGI13_500_1_fastqc.html [2021-02-15 10:46:13,977] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GH005_BGI13_500_1_fastqc.html [2021-02-15 10:46:13,977] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: GH005_BGI13_500_1_fastqc.html [2021-02-15 10:46:13,978] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: GH005_BGI13_500_1_fastqc.html [2021-02-15 10:46:13,978] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: GH005_BGI13_500_1_fastqc.html [2021-02-15 10:46:13,978] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: GH005_BGI13_500_1_fastqc.html [2021-02-15 10:46:13,978] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: GH005_BGI13_500_1_fastqc.html [2021-02-15 10:46:14,172] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: GH005_BGI19_500_2.fq [2021-02-15 10:46:14,362] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GH005_BGI13_500_2_fastqc.html [2021-02-15 10:46:14,426] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GH005_BGI13_500_2_fastqc.html [2021-02-15 10:46:14,426] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: GH005_BGI13_500_2_fastqc.html [2021-02-15 10:46:14,426] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: GH005_BGI13_500_2_fastqc.html [2021-02-15 10:46:14,426] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: GH005_BGI13_500_2_fastqc.html [2021-02-15 10:46:14,426] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: GH005_BGI13_500_2_fastqc.html [2021-02-15 10:46:14,426] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: GH005_BGI13_500_2_fastqc.html [2021-02-15 10:46:14,637] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: GH005_pycoQC.html [2021-02-15 10:46:14,748] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GH005_BGI19_270_2_fastqc.html [2021-02-15 10:46:14,810] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GH005_BGI19_270_2_fastqc.html [2021-02-15 10:46:14,810] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: GH005_BGI19_270_2_fastqc.html [2021-02-15 10:46:14,810] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: GH005_BGI19_270_2_fastqc.html [2021-02-15 10:46:14,810] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: GH005_BGI19_270_2_fastqc.html [2021-02-15 10:46:14,810] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: GH005_BGI19_270_2_fastqc.html [2021-02-15 10:46:14,810] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: GH005_BGI19_270_2_fastqc.html [2021-02-15 10:46:14,816] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: GH005_BGI19_270_2_fastqc.html [2021-02-15 10:46:15,040] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: GH005_BGI13_170_2.fq [2021-02-15 10:46:15,193] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GH005_aber19_300_1_fastqc.html [2021-02-15 10:46:15,258] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GH005_aber19_300_1_fastqc.html [2021-02-15 10:46:15,258] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: GH005_aber19_300_1_fastqc.html [2021-02-15 10:46:15,258] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: GH005_aber19_300_1_fastqc.html [2021-02-15 10:46:15,259] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: GH005_aber19_300_1_fastqc.html [2021-02-15 10:46:15,259] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: GH005_aber19_300_1_fastqc.html [2021-02-15 10:46:15,259] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: GH005_aber19_300_1_fastqc.html [2021-02-15 10:46:15,268] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: GH005_aber19_300_1_fastqc.html [2021-02-15 10:46:15,659] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: GH005_BGI13_500_2.fq [2021-02-15 10:46:15,659] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: GH005_BGI19_270_1.fq [2021-02-15 10:46:15,777] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GH005_BGI19_500_1_fastqc.html [2021-02-15 10:46:15,837] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GH005_BGI19_500_1_fastqc.html [2021-02-15 10:46:15,837] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: GH005_BGI19_500_1_fastqc.html [2021-02-15 10:46:15,837] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: GH005_BGI19_500_1_fastqc.html [2021-02-15 10:46:15,837] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: GH005_BGI19_500_1_fastqc.html [2021-02-15 10:46:15,837] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: GH005_BGI19_500_1_fastqc.html [2021-02-15 10:46:15,838] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: GH005_BGI19_500_1_fastqc.html [2021-02-15 10:46:15,842] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: GH005_BGI19_500_1_fastqc.html [2021-02-15 10:46:16,232] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GH005_BGI13_170_1_fastqc.html [2021-02-15 10:46:16,298] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GH005_BGI13_170_1_fastqc.html [2021-02-15 10:46:16,298] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: GH005_BGI13_170_1_fastqc.html [2021-02-15 10:46:16,299] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: GH005_BGI13_170_1_fastqc.html [2021-02-15 10:46:16,299] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: GH005_BGI13_170_1_fastqc.html [2021-02-15 10:46:16,299] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: GH005_BGI13_170_1_fastqc.html [2021-02-15 10:46:16,299] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: GH005_BGI13_170_1_fastqc.html [2021-02-15 10:46:16,588] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GH005_aber19_300_2_fastqc.html [2021-02-15 10:46:16,668] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GH005_aber19_300_2_fastqc.html [2021-02-15 10:46:16,668] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: GH005_aber19_300_2_fastqc.html [2021-02-15 10:46:16,668] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: GH005_aber19_300_2_fastqc.html [2021-02-15 10:46:16,668] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: GH005_aber19_300_2_fastqc.html [2021-02-15 10:46:16,668] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: GH005_aber19_300_2_fastqc.html [2021-02-15 10:46:16,669] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: GH005_aber19_300_2_fastqc.html [2021-02-15 10:46:16,676] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: GH005_aber19_300_2_fastqc.html [2021-02-15 10:46:17,059] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: GH005_BGI13_170_1.fq [2021-02-15 10:46:17,060] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: GH005_BGI19_270_2.fq [2021-02-15 10:46:17,164] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GH005_pycoQC.json [2021-02-15 10:46:17,189] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: GH005_aber19_300_2.fq [2021-02-15 10:46:17,315] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GH005_BGI19_500_2_fastqc.html [2021-02-15 10:46:17,402] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GH005_BGI19_500_2_fastqc.html [2021-02-15 10:46:17,402] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: GH005_BGI19_500_2_fastqc.html [2021-02-15 10:46:17,402] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: GH005_BGI19_500_2_fastqc.html [2021-02-15 10:46:17,402] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: GH005_BGI19_500_2_fastqc.html [2021-02-15 10:46:17,402] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: GH005_BGI19_500_2_fastqc.html [2021-02-15 10:46:17,402] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: GH005_BGI19_500_2_fastqc.html [2021-02-15 10:46:17,408] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: GH005_BGI19_500_2_fastqc.html [2021-02-15 10:46:17,603] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: GH005_BGI19_500_1.fq [2021-02-15 10:46:17,736] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GH005_BGI13_170_2_fastqc.html [2021-02-15 10:46:17,810] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GH005_BGI13_170_2_fastqc.html [2021-02-15 10:46:17,810] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: GH005_BGI13_170_2_fastqc.html [2021-02-15 10:46:17,810] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: GH005_BGI13_170_2_fastqc.html [2021-02-15 10:46:17,810] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: GH005_BGI13_170_2_fastqc.html [2021-02-15 10:46:17,810] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: GH005_BGI13_170_2_fastqc.html [2021-02-15 10:46:17,810] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: GH005_BGI13_170_2_fastqc.html [2021-02-15 10:46:19,033] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.4 [2021-02-15 10:46:19,039] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.4 [2021-02-15 10:46:19,047] multiqc [DEBUG ] No samples found: custom_content [2021-02-15 10:46:19,065] multiqc [DEBUG ] No samples found: conpair [2021-02-15 10:46:19,080] multiqc [DEBUG ] No samples found: peddy [2021-02-15 10:46:19,093] multiqc [DEBUG ] No samples found: somalier [2021-02-15 10:46:19,107] multiqc [DEBUG ] No samples found: methylQA [2021-02-15 10:46:19,140] multiqc [DEBUG ] No samples found: mosdepth [2021-02-15 10:46:19,155] multiqc [DEBUG ] No samples found: phantompeakqualtools [2021-02-15 10:46:19,163] multiqc [DEBUG ] No samples found: qualimap [2021-02-15 10:46:19,190] multiqc [DEBUG ] No samples found: preseq [2021-02-15 10:46:19,204] multiqc [DEBUG ] No samples found: quast [2021-02-15 10:46:19,216] multiqc [DEBUG ] No samples found: qorts [2021-02-15 10:46:19,230] multiqc [DEBUG ] No samples found: rna_seqc [2021-02-15 10:46:19,255] multiqc [DEBUG ] No samples found: rockhopper [2021-02-15 10:46:19,283] multiqc [DEBUG ] No samples found: rsem [2021-02-15 10:46:19,367] multiqc [DEBUG ] No samples found: rseqc [2021-02-15 10:46:19,384] multiqc [DEBUG ] No samples found: busco [2021-02-15 10:46:19,400] multiqc [DEBUG ] No samples found: goleft_indexcov [2021-02-15 10:46:19,412] multiqc [DEBUG ] No samples found: disambiguate [2021-02-15 10:46:19,428] multiqc [DEBUG ] No samples found: supernova [2021-02-15 10:46:19,471] multiqc [DEBUG ] No samples found: deeptools [2021-02-15 10:46:19,485] multiqc [DEBUG ] No samples found: sargasso [2021-02-15 10:46:19,498] multiqc [DEBUG ] No samples found: verifybamid [2021-02-15 10:46:19,513] multiqc [DEBUG ] No samples found: mirtrace [2021-02-15 10:46:19,527] multiqc [DEBUG ] No samples found: happy [2021-02-15 10:46:19,541] multiqc [DEBUG ] No samples found: mirtop [2021-02-15 10:46:19,573] multiqc [DEBUG ] No samples found: homer [2021-02-15 10:46:19,591] multiqc [DEBUG ] No samples found: macs2 [2021-02-15 10:46:19,609] multiqc [DEBUG ] No samples found: theta2 [2021-02-15 10:46:19,625] multiqc [DEBUG ] No samples found: snpeff [2021-02-15 10:46:19,647] multiqc [DEBUG ] No samples found: gatk [2021-02-15 10:46:19,673] multiqc [DEBUG ] No samples found: htseq [2021-02-15 10:46:19,700] multiqc [DEBUG ] No samples found: bcftools [2021-02-15 10:46:19,727] multiqc [DEBUG ] No samples found: featureCounts [2021-02-15 10:46:19,773] multiqc [DEBUG ] No samples found: fgbio [2021-02-15 10:46:19,859] multiqc [DEBUG ] No samples found: dragen [2021-02-15 10:46:19,873] multiqc [DEBUG ] No samples found: dedup [2021-02-15 10:46:19,890] multiqc [DEBUG ] No samples found: damageprofiler [2021-02-15 10:46:19,974] multiqc [DEBUG ] No samples found: biobambam2 [2021-02-15 10:46:19,989] multiqc [DEBUG ] No samples found: mtnucratio [2021-02-15 10:46:19,992] multiqc [DEBUG ] No samples found: picard [2021-02-15 10:46:20,004] multiqc [DEBUG ] No samples found: prokka [2021-02-15 10:46:20,017] multiqc [DEBUG ] No samples found: samblaster [2021-02-15 10:46:20,047] multiqc [DEBUG ] No samples found: samtools [2021-02-15 10:46:20,061] multiqc [DEBUG ] No samples found: sexdeterrmine [2021-02-15 10:46:20,112] multiqc [DEBUG ] No samples found: bamtools [2021-02-15 10:46:20,127] multiqc [DEBUG ] No samples found: jellyfish [2021-02-15 10:46:20,156] multiqc [DEBUG ] No samples found: vcftools [2021-02-15 10:46:20,243] multiqc [DEBUG ] No samples found: longranger [2021-02-15 10:46:20,256] multiqc [DEBUG ] No samples found: stacks [2021-02-15 10:46:20,269] multiqc [DEBUG ] No samples found: varscan2 [2021-02-15 10:46:20,403] multiqc [DEBUG ] No samples found: bbmap [2021-02-15 10:46:20,424] multiqc [DEBUG ] No samples found: bismark [2021-02-15 10:46:20,442] multiqc [DEBUG ] No samples found: biscuit [2021-02-15 10:46:20,465] multiqc [DEBUG ] No samples found: hicexplorer [2021-02-15 10:46:20,482] multiqc [DEBUG ] No samples found: hicup [2021-02-15 10:46:20,533] multiqc [DEBUG ] No samples found: hicpro [2021-02-15 10:46:20,548] multiqc [DEBUG ] No samples found: salmon [2021-02-15 10:46:20,561] multiqc [DEBUG ] No samples found: kallisto [2021-02-15 10:46:20,576] multiqc [DEBUG ] No samples found: slamdunk [2021-02-15 10:46:20,589] multiqc [DEBUG ] No samples found: star [2021-02-15 10:46:20,615] multiqc [DEBUG ] No samples found: hisat2 [2021-02-15 10:46:20,646] multiqc [DEBUG ] No samples found: tophat [2021-02-15 10:46:20,672] multiqc [DEBUG ] No samples found: bowtie2 [2021-02-15 10:46:20,687] multiqc [DEBUG ] No samples found: bowtie1 [2021-02-15 10:46:20,699] multiqc [DEBUG ] No samples found: snpsplit [2021-02-15 10:46:20,712] multiqc [DEBUG ] No samples found: kat [2021-02-15 10:46:20,727] multiqc [DEBUG ] No samples found: leehom [2021-02-15 10:46:20,740] multiqc [DEBUG ] No samples found: adapterRemoval [2021-02-15 10:46:20,753] multiqc [DEBUG ] No samples found: clipandmerge [2021-02-15 10:46:20,765] multiqc [DEBUG ] No samples found: cutadapt [2021-02-15 10:46:20,782] multiqc [DEBUG ] No samples found: flexbar [2021-02-15 10:46:20,832] multiqc [DEBUG ] No samples found: kaiju [2021-02-15 10:46:20,849] multiqc [DEBUG ] No samples found: kraken [2021-02-15 10:46:20,862] multiqc [DEBUG ] No samples found: malt [2021-02-15 10:46:20,877] multiqc [DEBUG ] No samples found: trimmomatic [2021-02-15 10:46:20,891] multiqc [DEBUG ] No samples found: sickle [2021-02-15 10:46:20,903] multiqc [DEBUG ] No samples found: skewer [2021-02-15 10:46:20,918] multiqc [DEBUG ] No samples found: sortmerna [2021-02-15 10:46:20,931] multiqc [DEBUG ] No samples found: biobloomtools [2021-02-15 10:46:20,942] multiqc [DEBUG ] No samples found: fastq_screen [2021-02-15 10:46:20,957] multiqc [DEBUG ] No samples found: afterqc [2021-02-15 10:46:20,971] multiqc [DEBUG ] No samples found: fastp [2021-02-15 10:46:21,380] multiqc.modules.fastqc.fastqc [INFO ] Found 10 reports [2021-02-15 10:46:22,314] multiqc.modules.pycoqc.pycoqc [INFO ] Found 1 reports [2021-02-15 10:46:22,335] multiqc [DEBUG ] No samples found: minionqc [2021-02-15 10:46:22,352] multiqc [DEBUG ] No samples found: multivcfanalyzer [2021-02-15 10:46:22,367] multiqc [DEBUG ] No samples found: clusterflow [2021-02-15 10:46:22,386] multiqc [DEBUG ] No samples found: bcl2fastq [2021-02-15 10:46:22,398] multiqc [DEBUG ] No samples found: interop [2021-02-15 10:46:22,414] multiqc [DEBUG ] No samples found: ivar [2021-02-15 10:46:22,437] multiqc [DEBUG ] No samples found: flash [2021-02-15 10:46:22,453] multiqc [DEBUG ] No samples found: seqyclean [2021-02-15 10:46:22,468] multiqc [INFO ] Compressing plot data [2021-02-15 10:46:22,699] multiqc [INFO ] Report : multiqc_report.html [2021-02-15 10:46:22,699] multiqc [INFO ] Data : multiqc_data [2021-02-15 10:46:22,699] multiqc [DEBUG ] Moving data file from '/tmp/tmpjlrq4fd3/multiqc_data' to '/data/Experments/E_37_SRA_Submission/Reads/GH005/multiqc_data' [2021-02-15 10:46:23,054] multiqc [INFO ] MultiQC complete