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Centre for Biophotonics

  1. Published

    Extracting biological information with computational analysis of Fourier transform infrared (FTIR) biospectroscopy datasets: current practices to future perspectives

    Trevisan, J., Angelov, P., Carmichael, P. L., Scott, A. & Martin, F., 2012, In : Analyst. 137, 14, p. 3202-3215 14 p.

    Research output: Contribution to journalJournal article

  2. Published

    Designing open, multi-class computational strategies to classify infrared spectroscopy data derived from the Syrian hamster embryo (SHE) assay

    Trevisan, J., Angelov, P. P., Carmichael, P. L., Scott, A. D. & Martin, F. L., 01/2012, In : Mutagenesis. 27, 1, p. 111-111 1 p.

    Research output: Contribution to journalMeeting abstract

  3. Published

    A mathematical framework for spectroscopy data analysis to characterize chemical-induced alterations in the SHE assay

    Trevisan, J., Angelov, P. P., Carmichael, P. L., Scott, A. D. & Martin, F. L., 11/2010, In : Mutagenesis. 25, 6, p. 658-658 1 p.

    Research output: Contribution to journalMeeting abstract

  4. Published

    Advances in Fourier-transform infrared spectroscopy analysis to characterise chemical-induced alterations in the Syrian hamster embryo assay-towards biomarkers stability

    Trevisan, J., Angelov, P. P., Carmichael, P. L., Scott, A. & Martin, F. L., 11/2012, In : Mutagenesis. 27, 6, p. 792-792 1 p.

    Research output: Contribution to journalMeeting abstract

  5. Published

    Measuring similarity and improving stability in biomarker identification methods applied to Fourier-transform infrared (FTIR) spectroscopy

    Trevisan, J., Park, J., Angelov, P., Ahmadzai, A., Gajjar, K., Scott, A. D., Carmichael, P. L. & Martin, F., 04/2014, In : Journal of Biophotonics. 7, 3-4, p. 254-265 12 p.

    Research output: Contribution to journalJournal article

  6. Published
  7. Published

    IRootLab: A free and open-source MATLAB toolbox for vibrational biospectroscopy data analysis

    Trevisan, J., Angelov, P. P., Scott, A. D., Carmichael, P. L. & Martin, F. L., 15/04/2013, In : Bioinformatics. 29, 8, p. 1095-1097 3 p.

    Research output: Contribution to journalJournal article

  8. Published

    Nanoscale spatial resolution probes for Scanning Thermal Microscopy of solid state materials

    Tovee, P., Pumarol, M., Zeze, D., Kjoller, K. & Kolosov, O., 27/10/2011, In : arxiv.org.

    Research output: Contribution to journalJournal article

  9. Published

    Nanoscale spatial resolution probes for scanning thermal microscopy of solid state materials

    Tovee, P., Pumarol Crestar, M., Zeze, D., Kjoller, K. & Kolosov, O., 7/12/2012, In : Journal of Applied Physics. 112, 11, 11 p., 114317.

    Research output: Contribution to journalJournal article

  10. Published

    Additions and corrections to Association of DNA Methylation and Mitochondrial DNA Copy Number with Human Semen Quality

    Tian, M., Bao, H., Martin, F. L., Zhang, J., Liu, L., Huang, Q. & Shen, H., 1/03/2015, In : Biology of Reproduction. 92, 3, p. 61 1 p.

    Research output: Contribution to journalJournal article

  11. Published

    Assessment of MTBE biodegradation in contaminated groundwater using 13C and 14C analysis: field and laboratory microcosm studies

    Thornton, S., Bottrell, S., Spence, K., Pickup, R., Spence, M., Mallinson, H., Shah, N. & Richnow, H. R., 05/2011, In : Applied Geochemistry. 26, 5, p. 828-837 9 p.

    Research output: Contribution to journalJournal article

  12. Published

    Low leakage-current InAsSb nanowire photodetectors on silicon

    Thompson, M. D., Alhodaib, A., Craig, A. P., Robson, A. J., Aziz, A., Krier, A., Svensson, J., Wernersson, L., Sanchez, A. M. & Marshall, A. R. J., 13/01/2016, In : Nano Letters. 16, 1, p. 182-187 6 p.

    Research output: Contribution to journalJournal article

  13. Published

    Extracting biomarkers of commitment to cancer development: potential role of vibrational spectroscopy in systems biology

    Theophilou, G., Paraskevaidi, M., Gomes De Lima, K. M., Kyrgiou, M., Martin-Hirsch, P. L. & Martin, F. L., 4/05/2015, In : Expert Review of Molecular Diagnostics. 15, 5, p. 693-713 21 p.

    Research output: Contribution to journalJournal article

  14. Published

    A biospectroscopic analysis of human prostate tissue obtained from different time periods points to a trans-generational alteration in spectral phenotype

    Theophilou, G., Gomes De Lima, K. M., Briggs, M., Martin-Hirsch, P. L., Stringfellow, H. F. & Martin, F. L., 27/08/2015, In : Scientific Reports. 5, 14 p., 13465.

    Research output: Contribution to journalJournal article

  15. Published

    Forest filter effect: role of leaves in capturing/releasing air particulate matter and its associated PAHs

    Terzaghi, E., Wild, E., Zacchello, G., Cerabolini, B. E. L., Jones, K. C. & Di Guardo, A., 08/2013, In : Atmospheric Environment. 74, p. 378-384 7 p.

    Research output: Contribution to journalJournal article

  16. Published

    Towards more ecologically realistic scenarios of plant uptake modelling for chemicals: PAHs in a small forest

    Terzaghi, E., Zacchello, G., Scacchi, M., Raspa, G., Jones, K. C., Cerabolini, B. & Di Guardo, A., 1/02/2015, In : Science of the Total Environment. 505, p. 329-337 9 p.

    Research output: Contribution to journalJournal article

  17. Published

    Estimation of polycyclic aromatic hydrocarbon variability in air using high volume, film, and vegetation as samplers

    Terzaghi, E., Scacchi, M., Cerabolini, B., Jones, K. C. & Di Guardo, A., 5/05/2015, In : Environmental Science and Technology. 49, 9, p. 5520-5528 9 p.

    Research output: Contribution to journalJournal article

  18. Published

    Organochlorine pesticides in air and soil and estimated air–soil exchange in Punjab, Pakistan

    Syed, J. H., Malik, R. N., Liu, D., Xu, Y., Wang, Y., Li, J., Zhang, G. & Jones, K. C., 1/02/2013, In : Science of the Total Environment. 444, p. 491-497 7 p.

    Research output: Contribution to journalJournal article

  19. Published

    Levels, distribution and air-soil exchange fluxes of polychlorinated biphenyls (PCBs) in the environment of Punjab Province, Pakistan

    Syed, J. H., Malik, R. N., Li, J., Zhang, G. & Jones, K. C., 1/11/2013, In : Ecotoxicology and Environmental Safety. 97, p. 189-195 7 p.

    Research output: Contribution to journalJournal article

  20. Published

    Levels, profile and distribution of Dechloran Plus (DP) and Polybrominated Diphenyl Ethers (PBDEs) in the environment of Pakistan

    Syed, J. H., Malik, R. N., Li, J., Wang, Y., Xu, Y., Zhang, G. & Jones, K. C., 11/2013, In : Chemosphere. 93, 8, p. 1646-1653 8 p.

    Research output: Contribution to journalJournal article

  21. Published

    Status, distribution and ecological risk of organochlorines (OCs) in the surface sediments from the Ravi River, Pakistan

    Syed, J. H., Malik, R. N., Li, J., Chaemfa, C., Zhang, G. & Jones, K. C., 15/02/2014, In : Science of the Total Environment. 472, p. 204-211 8 p.

    Research output: Contribution to journalJournal article

  22. Published

    OSA: one-class recursive SVM algorithm with negative samples for fault detection

    Suvorov, M., Ivliev, S., Markarian, G., Kolev, D., Zvikhachevskiy, D. & Angelov, P., 2013, Artificial neural networks and machine learning – ICANN 2013: 23rd International Conference on Artificial Neural Networks Sofia, Bulgaria, September 10-13, 2013. Proceedings. Mladenov, V., Koprinkova-Hristova, P., Palm, G., Villa, A. E. P., Appollini, B. & Kasabov, N. (eds.). Berlin: Springer Verlag, p. 194-207 14 p. (Lecture Notes in Computer Science; vol. 8131).

    Research output: Contribution in Book/Report/Proceedings - With ISBN/ISSNConference contribution/Paper

  23. Published

    Incremental anomaly identification by adapted SVM method

    Suvorov, M., Ivliev, S., Markarian, G., Kolev, D., Zvikhachevskiy, D. & Angelov, P., 08/2013, International Joint Conference on Neural Networks, IJCNN-2013, Dallas, TX, USA, 3-9 August, 2013. Piscataway, N.J.: IEEE, p. 1-8 8 p.

    Research output: Contribution in Book/Report/Proceedings - With ISBN/ISSNConference contribution/Paper

  24. Published

    Development and characterisation of a new Sr selective resin for the rapid determination of 90Sr in environmental water samples.

    Surman, J., Pates, J., Zhang, H. & Happel, S., 1/11/2014, In : Talanta. 129, p. 623-628 6 p.

    Research output: Contribution to journalJournal article

  25. Published

    Environmentally relevant levels of the genotoxin cyclophosphamide induce alterations in MCF-7 cells detectable by biospectroscopy approaches

    Strong, R., Halsall, C. J., Jones, K. C. & Martin, F. L., 11/2012, In : Mutagenesis. 27, 6, p. 814-814 1 p.

    Research output: Contribution to journalMeeting abstract

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