Coordinating the real‐time use of global influenza activity data for better public health planning

Biggerstaff, M., Dahlgren, F., Fitzner, J., George, D., Hammond, A., Hall, I., Haw, D., Imai, N., Johansson, M., Kramer, S., McCaw, J., Moss, R., Pebody, R., Read, J., Reed, C., Reich, N., Riley, S., Vandemaele, K., Viboud, C. & Wu, J., 1/03/2020, In: Influenza and Other Respiratory Viruses. 14, 2, p. 105-110 6 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Domestic river water use and risk of typhoid fever: results from a case-control study in Blantyre, Malawi

Gauld, J. S., Olgemoeller, F., Nkhata, R., Li, C., Chirambo, A., Morse, T., Gordon, M. A., Read, J. M., Heyderman, R. S., Kennedy, N., Diggle, P. J. & Feasey, N. A., 1/04/2020, In: Clinical Infectious Diseases. 70, 7, p. 1278-1284 7 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Features of 20 133 UK patients in hospital with covid-19 using the ISARIC WHO Clinical Characterisation Protocol: Prospective observational cohort study

Docherty, A. B., Harrison, E. M., Green, C. A., Hardwick, H. E., Pius, R., Norman, L., Holden, K. A., Read, J. M., Dondelinger, F., Carson, G., Merson, L., Lee, J., Plotkin, D., Sigfrid, L., Halpin, S., Jackson, C., Gamble, C., Horby, P. W., Nguyen-Van-Tam, J. S., Ho, A., & 5 othersRussell, C. D., Dunning, J., Openshaw, P. J. M., Baillie, J. K. & Semple, M. G., 22/05/2020, In: BMJ. 369, 12 p., m1985.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Life course exposures continually shape antibody profiles and risk of seroconversion to influenza

Yang, B., Lessler, J., Zhu, H., Jiang, C. Q., Read, J. M., Hay, J. A., Kwok, K. O., Shen, R., Guan, Y., Riley, S. & Cummings, D. A. T., 23/07/2020, In: PLoS Pathogens. 16, 7, e1008635.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Intestinal Perforations Associated With a High Mortality and Frequent Complications During an Epidemic of Multidrug-resistant Typhoid Fever in Blantyre, Malawi

Olgemoeller, F., Waluza, J. J., Zeka, D., Gauld, J. S., Diggle, P. J., Read, J. M., Edwards, T., Msefula, C. L., Chirambo, A., Gordon, M. A., Thomson, E., Heyderman, R. S., Borgstein, E. & Feasey, N. A., 29/07/2020, In: Clinical Infectious Diseases. 71, Supplement 2, p. S96-S101 6 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

The potential impact of COVID-19-related disruption on tuberculosis burden

CMMID COVID-19 Working Group, 13/08/2020, In: European Respiratory Journal. 56, 2, 4 p., 2001718.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Efficacy of contact tracing for the containment of the 2019 novel coronavirus (COVID-19)

Keeling, M. J., Hollingsworth, T. D. & Read, J. M., 8/09/2020, In: Journal of Epidemiology and Community Health. 74, 10, p. 861-866 6 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Strong spatial embedding of social networks generates nonstandard epidemic dynamics independent of degree distribution and clustering

Haw, D. J., Pung, R., Read, J. M. & Riley, S., 22/09/2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 38, p. 23636-23642 7 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Age-specific social mixing of school-aged children in a US setting using proximity detecting sensors and contact surveys

Grantz, K. H., Cummings, D. A. T., Zimmer, S., Vukotich Jr, C., Galloway, D., Schweizer, M. L., Guclu, H., Cousins, J., Lingle, C., Yearwood, G. M. H., Li, K., Calderone, P., Noble, E., Gao, H., Rainey, J., Uzicanin, A. & Read, J. M., 27/01/2021, In: Scientific Reports. 11, 1, 11 p., 2319.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Risk of mortality in patients infected with SARS-CoV-2 variant of concern 202012/1: Matched cohort study

Challen, R., Brooks-Pollock, E., Read, J. M., Dyson, L., Tsaneva-Atanasova, K. & Danon, L., 10/03/2021, In: BMJ. 372, 10 p., 579.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Influenza and other respiratory viral infections associated with absence from school among schoolchildren in Pittsburgh, Pennsylvania, USA: a cohort study

Read, J. M., Zimmer, S., Vukotich C., J., Schweizer, M. L., Galloway, D., Lingle, C., Yearwood, G., Calderone, P., Noble, E., Quadelacy, T., Grantz, K., Rinaldo, C., Gao, H., Rainey, J., Uzicanin, A. & Cummings, D. A. T., 22/03/2021, In: BMC Infectious Diseases. 21, 1, 10 p., 291.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Reconstructing unseen transmission events to infer dengue dynamics from viral sequences

Salje, H., Wesolowski, A., Brown, T. S., Kiang, M. V., Berry, I. M., Lefrancq, N., Fernandez, S., Jarman, R. G., Ruchusatsawat, K., Iamsirithaworn, S., Vandepitte, W. P., Suntarattiwong, P., Read, J. M., Klungthong, C., Thaisomboonsuk, B., Engø-Monsen, K., Buckee, C., Cauchemez, S. & Cummings, D. A. T., 22/03/2021, In: Nature Communications. 12, 1, 10 p., 1810.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Using serological measures to estimate influenza incidence in the presence of secular trends in exposure and immuno-modulation of antibody response

Quandelacy, T. M., Cummings, D. A. T., Jiang, C. Q., Yang, B., Kwok, K. O., Dai, B., Shen, R., Read, J. M., Zhu, H., Guan, Y., Riley, S. & Lessler, J., 31/03/2021, In: Influenza and Other Respiratory Viruses. 15, 2, p. 235-244 10 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Modelling the impact of respiratory syncytial virus (RSV) vaccine and immunoprophylaxis strategies in New Zealand

Prasad, N., Read, J. M., Jewell, C., Waite, B., Trenholme, A. A., Huang, Q. S., Grant, C. C., Newbern, E. C. & Hogan, A. B., 13/07/2021, In: Vaccine. 39, 31, p. 4383-4390 8 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Mapping social distancing measures to the reproduction number for COVID-19

Brooks-Pollock, E., Read, J. M., McLean, A. R., Keeling, M. J. & Danon, L., 19/07/2021, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 376, 1829, 7 p., 20200276.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Novel coronavirus 2019-nCoV (COVID-19): Early estimation of epidemiological parameters and epidemic size estimates

Read, J. M., Bridgen, J. R. E., Cummings, D. A. T., Ho, A. & Jewell, C. P., 19/07/2021, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 376, 1829, 9 p., 20200265.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

The population attributable fraction of cases due to gatherings and groups with relevance to COVID-19 mitigation strategies

Brooks-Pollock, E., Read, J. M., House, T., Medley, G. F., Keeling, M. J. & Danon, L., 19/07/2021, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 376, 1829, 5 p., 20200273.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Hospital-acquired SARS-CoV-2 infection in the UK's first COVID-19 pandemic wave

Read, J., Green, C., Harrison, E., Docherty, A., Funk, S., Harrison, J., Girvan, M., Hardwick, H., Dunning, J., Nguyen-Van-Tam, J., Openshaw, P., Baillie, K. & Semple, M., 18/09/2021, In: The Lancet. 398, 10305, p. 1037-1038 2 p.

Research output: Contribution to Journal/Magazine › Letter › peer-review

Trends, relationships and case attribution of antibiotic resistance between children and environmental sources in rural India

Mitchell, J., Purohit, M., Jewell, C. P., Read, J. M., Marrone, G., Diwan, V. & Stålsby Lundborg, C., 19/11/2021, In: Scientific Reports. 11, 1, 11 p., 22599.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Predicting virologically confirmed influenza using school absences in Allegheny County, Pennsylvania, USA during the 2007-2015 influenza seasons

Quandelacy, T. M., Zimmer, S., Lessler, J., Vukotich, C., Bieltz, R., Grantz, K. H., Galloway, D., Read, J. M., Zheteyeva, Y., Gao, H., Uzicanin, A. & Cummings, D. A. T., 30/11/2021, In: Influenza and Other Respiratory Viruses. 15, 6, p. 757-766 10 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Estimating the potential for global dissemination of pandemic pathogens using the global airline network and healthcare development indices

Meslé, M. MI., Vivancos, R., Hall, I. M., Christley, R. M., Leach, S. & Read, J., 23/02/2022, In: Scientific Reports. 12, 9 p., 3070.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Effectiveness of infection prevention and control interventions, excluding personal protective equipment, to prevent nosocomial transmission of SARS-CoV-2: a systematic review and call for action

Jafari, Y., Yin, M., Lim, C., Pople, D., Evans, S., Stimson, J., Pham, T. M., Read, J. M., Robotham, J. V., Cooper, B. S., Knight, G. M. & group, LSHTM. CMMID. COVID. W., 1/03/2022, In: Infection Prevention in Practice. 4, 1, 12 p., 100192.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Rainfall Anomalies and Typhoid Fever in Blantyre, Malawi

Gauld, J. S., Bilima, S., Diggle, P. J., Feasey, N. A. & Read, J. M., 10/05/2022, In: Epidemiology and Infection. 150, e122.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Spatial and Genomic Data to Characterize Endemic Typhoid Transmission

Gauld, J. S., Olgemoeller, F., Heinz, E., Nkhata, R., Bilima, S., Wailan, A. M., Kennedy, N., Mallewa, J., Gordon, M. A., Read, J. M., Heyderman, R. S., Thomson, N. R., Diggle, P. J. & Feasey, N. A., 1/06/2022, In: Clinical Infectious Diseases. 74, 11, p. 1993-2000 8 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

The contribution of hospital-acquired infections to the COVID-19 epidemic in England in the first half of 2020

Knight, G. M., Pham, T. M., Stimson, J., Funk, S., Jafari, Y., Pople, D., Evans, S., Yin, M., Brown, C. S., Bhattacharya, A., Hope, R., Semple, M. G., Read, J. M., Cooper, B. S. & Robotham, J. V., 18/06/2022, In: BMC Infectious Diseases. 22, 1, 14 p., 556.

Research output: Contribution to Journal/Magazine › Journal article › peer-review