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Deficit irrigation differentially modulates rhizosphere microbial community and metabolites of two potato genotypes differing in drought tolerance

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Deficit irrigation differentially modulates rhizosphere microbial community and metabolites of two potato genotypes differing in drought tolerance. / Qin, J.; Dodd, I.C.; Bian, C. et al.
In: Journal of Environmental Management, Vol. 373, 123836, 31.01.2025.

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Qin J, Dodd IC, Bian C, Li G, Jin L. Deficit irrigation differentially modulates rhizosphere microbial community and metabolites of two potato genotypes differing in drought tolerance. Journal of Environmental Management. 2025 Jan 31;373:123836. Epub 2024 Dec 26. doi: 10.1016/j.jenvman.2024.123836

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@article{adeca13296464d3690ee15ddd55602aa,
title = "Deficit irrigation differentially modulates rhizosphere microbial community and metabolites of two potato genotypes differing in drought tolerance",
abstract = "Beneficial interactions between plant root exudates and the rhizosphere microbial community can alleviate the adverse effects of environmental stress on crop yields, but these interactions remain poorly understood in potato growing in drying soil. We investigated the responses of rhizosphere soil microorganisms and metabolites, and biochemical and physiological responses of two potato genotypes with contrasting drought tolerance (drought tolerant {\textquoteleft}C93{\textquoteright} and drought sensitive {\textquoteleft}Favorita{\textquoteright}), to two different irrigation treatments imposing contrasting soil water availability in the field. Deficit irrigation altered rhizosphere soil bacterial communities and metabolites of C93 more than Favorita. While the abundance of Nitrosospira and Nitrobacter belonging to the Proteobacteria increased in C93, in Favorita the Streptomyces and Nocardioides belonging to the Actinobacteria increased. These microbial changes were significantly correlated with rhizosphere organic acid concentrations, with 3-phenyllactic acid increasing in C93, and citric acid increasing in Favorita. Although deficit irrigation restricted shoot growth of C93 at the tuber initiation stage (unlike Favorita), its specific root length was 41% greater than Favorita irrespective of irrigation treatment. Deficit irrigation significantly increased foliar chlorophyll and proline accumulation of both genotypes, with the latter 28% higher in Favorita. Independent of irrigation treatment, yield of the more vigorous C93 (producing 22 and 89% more shoot biomass under deficit and full irrigation respectively) was 84% higher than Favorita. It was concluded that different potato genotypes selectively recruit beneficial microorganisms by secreting different organic acids to alleviate the adverse effects of deficit irrigation. ",
keywords = "Actinobacteria, Microbiome, Proteobacteria, Specific root length, Tuber initiation, Deficit irrigation, Drought tolerances, Irrigation treatments, Potato genotypes, Rhizosphere microbial communities, Plant diseases",
author = "J. Qin and I.C. Dodd and C. Bian and G. Li and L. Jin",
year = "2025",
month = jan,
day = "31",
doi = "10.1016/j.jenvman.2024.123836",
language = "English",
volume = "373",
journal = "Journal of Environmental Management",
issn = "0301-4797",
publisher = "Academic Press",

}

RIS

TY - JOUR

T1 - Deficit irrigation differentially modulates rhizosphere microbial community and metabolites of two potato genotypes differing in drought tolerance

AU - Qin, J.

AU - Dodd, I.C.

AU - Bian, C.

AU - Li, G.

AU - Jin, L.

PY - 2025/1/31

Y1 - 2025/1/31

N2 - Beneficial interactions between plant root exudates and the rhizosphere microbial community can alleviate the adverse effects of environmental stress on crop yields, but these interactions remain poorly understood in potato growing in drying soil. We investigated the responses of rhizosphere soil microorganisms and metabolites, and biochemical and physiological responses of two potato genotypes with contrasting drought tolerance (drought tolerant ‘C93’ and drought sensitive ‘Favorita’), to two different irrigation treatments imposing contrasting soil water availability in the field. Deficit irrigation altered rhizosphere soil bacterial communities and metabolites of C93 more than Favorita. While the abundance of Nitrosospira and Nitrobacter belonging to the Proteobacteria increased in C93, in Favorita the Streptomyces and Nocardioides belonging to the Actinobacteria increased. These microbial changes were significantly correlated with rhizosphere organic acid concentrations, with 3-phenyllactic acid increasing in C93, and citric acid increasing in Favorita. Although deficit irrigation restricted shoot growth of C93 at the tuber initiation stage (unlike Favorita), its specific root length was 41% greater than Favorita irrespective of irrigation treatment. Deficit irrigation significantly increased foliar chlorophyll and proline accumulation of both genotypes, with the latter 28% higher in Favorita. Independent of irrigation treatment, yield of the more vigorous C93 (producing 22 and 89% more shoot biomass under deficit and full irrigation respectively) was 84% higher than Favorita. It was concluded that different potato genotypes selectively recruit beneficial microorganisms by secreting different organic acids to alleviate the adverse effects of deficit irrigation.

AB - Beneficial interactions between plant root exudates and the rhizosphere microbial community can alleviate the adverse effects of environmental stress on crop yields, but these interactions remain poorly understood in potato growing in drying soil. We investigated the responses of rhizosphere soil microorganisms and metabolites, and biochemical and physiological responses of two potato genotypes with contrasting drought tolerance (drought tolerant ‘C93’ and drought sensitive ‘Favorita’), to two different irrigation treatments imposing contrasting soil water availability in the field. Deficit irrigation altered rhizosphere soil bacterial communities and metabolites of C93 more than Favorita. While the abundance of Nitrosospira and Nitrobacter belonging to the Proteobacteria increased in C93, in Favorita the Streptomyces and Nocardioides belonging to the Actinobacteria increased. These microbial changes were significantly correlated with rhizosphere organic acid concentrations, with 3-phenyllactic acid increasing in C93, and citric acid increasing in Favorita. Although deficit irrigation restricted shoot growth of C93 at the tuber initiation stage (unlike Favorita), its specific root length was 41% greater than Favorita irrespective of irrigation treatment. Deficit irrigation significantly increased foliar chlorophyll and proline accumulation of both genotypes, with the latter 28% higher in Favorita. Independent of irrigation treatment, yield of the more vigorous C93 (producing 22 and 89% more shoot biomass under deficit and full irrigation respectively) was 84% higher than Favorita. It was concluded that different potato genotypes selectively recruit beneficial microorganisms by secreting different organic acids to alleviate the adverse effects of deficit irrigation.

KW - Actinobacteria

KW - Microbiome

KW - Proteobacteria

KW - Specific root length

KW - Tuber initiation

KW - Deficit irrigation

KW - Drought tolerances

KW - Irrigation treatments

KW - Potato genotypes

KW - Rhizosphere microbial communities

KW - Plant diseases

U2 - 10.1016/j.jenvman.2024.123836

DO - 10.1016/j.jenvman.2024.123836

M3 - Journal article

VL - 373

JO - Journal of Environmental Management

JF - Journal of Environmental Management

SN - 0301-4797

M1 - 123836

ER -