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Semantically linking and browsing provenance logs for e-science

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Semantically linking and browsing provenance logs for e-science. / Zhao, Jun; Goble, Carole; Stevens, Robert et al.
Semantics of a Networked World. Semantics for Grid Databases: First International IFIP Conference, ICSNW 2004, Paris, France, June 17-19, 2004, Revised Selected Papers. ed. / Mokrane Bouzeghoub; Carole Goble; Vipul Kashyap; Stefano Spaccapietra. Berlin: Springer Verlag, 2004. p. 158-176 (Lecture Notes in Computer Science; Vol. 3226).

Research output: Contribution in Book/Report/Proceedings - With ISBN/ISSNConference contribution/Paperpeer-review

Harvard

Zhao, J, Goble, C, Stevens, R & Bechhofer, S 2004, Semantically linking and browsing provenance logs for e-science. in M Bouzeghoub, C Goble, V Kashyap & S Spaccapietra (eds), Semantics of a Networked World. Semantics for Grid Databases: First International IFIP Conference, ICSNW 2004, Paris, France, June 17-19, 2004, Revised Selected Papers. Lecture Notes in Computer Science, vol. 3226, Springer Verlag, Berlin, pp. 158-176. https://doi.org/10.1007/978-3-540-30145-5_10

APA

Zhao, J., Goble, C., Stevens, R., & Bechhofer, S. (2004). Semantically linking and browsing provenance logs for e-science. In M. Bouzeghoub, C. Goble, V. Kashyap, & S. Spaccapietra (Eds.), Semantics of a Networked World. Semantics for Grid Databases: First International IFIP Conference, ICSNW 2004, Paris, France, June 17-19, 2004, Revised Selected Papers (pp. 158-176). (Lecture Notes in Computer Science; Vol. 3226). Springer Verlag. https://doi.org/10.1007/978-3-540-30145-5_10

Vancouver

Zhao J, Goble C, Stevens R, Bechhofer S. Semantically linking and browsing provenance logs for e-science. In Bouzeghoub M, Goble C, Kashyap V, Spaccapietra S, editors, Semantics of a Networked World. Semantics for Grid Databases: First International IFIP Conference, ICSNW 2004, Paris, France, June 17-19, 2004, Revised Selected Papers. Berlin: Springer Verlag. 2004. p. 158-176. (Lecture Notes in Computer Science). doi: 10.1007/978-3-540-30145-5_10

Author

Zhao, Jun ; Goble, Carole ; Stevens, Robert et al. / Semantically linking and browsing provenance logs for e-science. Semantics of a Networked World. Semantics for Grid Databases: First International IFIP Conference, ICSNW 2004, Paris, France, June 17-19, 2004, Revised Selected Papers. editor / Mokrane Bouzeghoub ; Carole Goble ; Vipul Kashyap ; Stefano Spaccapietra. Berlin : Springer Verlag, 2004. pp. 158-176 (Lecture Notes in Computer Science).

Bibtex

@inproceedings{28b94e84ae6b4897800ad4f0910c04a1,
title = "Semantically linking and browsing provenance logs for e-science",
abstract = "e-Science experiments are those performed using computer-based resources such as database searches, simulations or other applications. Like their laboratory based counterparts, the data associated with an e-Science experiment are of reduced value if other scientists are not able to identify the origin, or provenance, of those data. Provenance is the term given to metadata about experiment processes, the derivation paths of data, and the sources and quality of experimental components, which includes the scientists themselves, related literature, etc. Consequently provenance metadata are valuable resources for e-Scientists to repeat experiments, track versions of data and experiment runs, verify experiment results, and as a source of experimental insight. One specific kind of in silico experiment is a workflow. In this paper we describe how we can assemble a Semantic Web of workflow provenance logs that allows a bioinformatician to browse and navigate between experimental components by generating hyperlinks based on semantic annotations associated with them. By associating well-formalized semantics with workflow logs we take a step towards integration of process provenance information and improved knowledge discovery.",
author = "Jun Zhao and Carole Goble and Robert Stevens and Sean Bechhofer",
year = "2004",
doi = "10.1007/978-3-540-30145-5_10",
language = "English",
isbn = "9783540236092",
series = "Lecture Notes in Computer Science",
publisher = "Springer Verlag",
pages = "158--176",
editor = "Mokrane Bouzeghoub and Carole Goble and Vipul Kashyap and Stefano Spaccapietra",
booktitle = "Semantics of a Networked World. Semantics for Grid Databases",

}

RIS

TY - GEN

T1 - Semantically linking and browsing provenance logs for e-science

AU - Zhao, Jun

AU - Goble, Carole

AU - Stevens, Robert

AU - Bechhofer, Sean

PY - 2004

Y1 - 2004

N2 - e-Science experiments are those performed using computer-based resources such as database searches, simulations or other applications. Like their laboratory based counterparts, the data associated with an e-Science experiment are of reduced value if other scientists are not able to identify the origin, or provenance, of those data. Provenance is the term given to metadata about experiment processes, the derivation paths of data, and the sources and quality of experimental components, which includes the scientists themselves, related literature, etc. Consequently provenance metadata are valuable resources for e-Scientists to repeat experiments, track versions of data and experiment runs, verify experiment results, and as a source of experimental insight. One specific kind of in silico experiment is a workflow. In this paper we describe how we can assemble a Semantic Web of workflow provenance logs that allows a bioinformatician to browse and navigate between experimental components by generating hyperlinks based on semantic annotations associated with them. By associating well-formalized semantics with workflow logs we take a step towards integration of process provenance information and improved knowledge discovery.

AB - e-Science experiments are those performed using computer-based resources such as database searches, simulations or other applications. Like their laboratory based counterparts, the data associated with an e-Science experiment are of reduced value if other scientists are not able to identify the origin, or provenance, of those data. Provenance is the term given to metadata about experiment processes, the derivation paths of data, and the sources and quality of experimental components, which includes the scientists themselves, related literature, etc. Consequently provenance metadata are valuable resources for e-Scientists to repeat experiments, track versions of data and experiment runs, verify experiment results, and as a source of experimental insight. One specific kind of in silico experiment is a workflow. In this paper we describe how we can assemble a Semantic Web of workflow provenance logs that allows a bioinformatician to browse and navigate between experimental components by generating hyperlinks based on semantic annotations associated with them. By associating well-formalized semantics with workflow logs we take a step towards integration of process provenance information and improved knowledge discovery.

U2 - 10.1007/978-3-540-30145-5_10

DO - 10.1007/978-3-540-30145-5_10

M3 - Conference contribution/Paper

SN - 9783540236092

T3 - Lecture Notes in Computer Science

SP - 158

EP - 176

BT - Semantics of a Networked World. Semantics for Grid Databases

A2 - Bouzeghoub, Mokrane

A2 - Goble, Carole

A2 - Kashyap, Vipul

A2 - Spaccapietra, Stefano

PB - Springer Verlag

CY - Berlin

ER -