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Soil microbiomes show consistent and predictable responses to extreme events

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Soil microbiomes show consistent and predictable responses to extreme events. / Knight, C.G.; Nicolitch, O.; Griffiths, R.I. et al.
In: Nature, Vol. 636, No. 8043, 19, 19.12.2024, p. 690-696.

Research output: Contribution to Journal/MagazineJournal articlepeer-review

Harvard

Knight, CG, Nicolitch, O, Griffiths, RI, Goodall, T, Jones, B, Weser, C, Langridge, H, Davison, J, Dellavalle, A, Eisenhauer, N, Gongalsky, KB, Hector, A, Jardine, E, Kardol, P, Maestre, FT, Schädler, M, Semchenko, M, Stevens, C, Tsiafouli, M, Vilhelmsson, O, Wanek, W & de Vries, FT 2024, 'Soil microbiomes show consistent and predictable responses to extreme events', Nature, vol. 636, no. 8043, 19, pp. 690-696. https://doi.org/10.1038/s41586-024-08185-3

APA

Knight, C. G., Nicolitch, O., Griffiths, R. I., Goodall, T., Jones, B., Weser, C., Langridge, H., Davison, J., Dellavalle, A., Eisenhauer, N., Gongalsky, K. B., Hector, A., Jardine, E., Kardol, P., Maestre, F. T., Schädler, M., Semchenko, M., Stevens, C., Tsiafouli, M., ... de Vries, F. T. (2024). Soil microbiomes show consistent and predictable responses to extreme events. Nature, 636(8043), 690-696. Article 19. https://doi.org/10.1038/s41586-024-08185-3

Vancouver

Knight CG, Nicolitch O, Griffiths RI, Goodall T, Jones B, Weser C et al. Soil microbiomes show consistent and predictable responses to extreme events. Nature. 2024 Dec 19;636(8043):690-696. 19. Epub 2024 Nov 27. doi: 10.1038/s41586-024-08185-3

Author

Knight, C.G. ; Nicolitch, O. ; Griffiths, R.I. et al. / Soil microbiomes show consistent and predictable responses to extreme events. In: Nature. 2024 ; Vol. 636, No. 8043. pp. 690-696.

Bibtex

@article{d370aa64fc824446b96e69af18bb4abf,
title = "Soil microbiomes show consistent and predictable responses to extreme events",
abstract = "Increasing extreme climatic events threaten the functioning of terrestrial ecosystems . Because soil microbes govern key biogeochemical processes, understanding their response to climate extremes is crucial in predicting the consequences for ecosystem functioning . Here we subjected soils from 30 grasslands across Europe to four contrasting extreme climatic events under common controlled conditions (drought, flood, freezing and heat), and compared the response of soil microbial communities and their functioning with those of undisturbed soils. Soil microbiomes exhibited a small, but highly consistent and phylogenetically conserved, response under the imposed extreme events. Heat treatment most strongly impacted soil microbiomes, enhancing dormancy and sporulation genes and decreasing metabolic versatility. Microbiome response to heat in particular could be predicted by local climatic conditions and soil properties, with soils that do not normally experience the extreme conditions being imposed being most vulnerable. Our results suggest that soil microbiomes from different climates share unified responses to extreme climatic events, but that predicting the extent of community change may require knowledge of the local microbiome. These findings advance our understanding of soil microbial responses to extreme events, and provide a first step for making general predictions about the impact of extreme climatic events on soil functioning. [Abstract copyright: {\textcopyright} 2024. The Author(s).]",
keywords = "article, climate, dormancy, drought, freezing, grassland, heat treatment, microbiome, nonhuman, prediction, soil, soil microflora, soil property, sporogenesis",
author = "C.G. Knight and O. Nicolitch and R.I. Griffiths and T. Goodall and B. Jones and C. Weser and H. Langridge and J. Davison and A. Dellavalle and N. Eisenhauer and K.B. Gongalsky and A. Hector and E. Jardine and P. Kardol and F.T. Maestre and M. Sch{\"a}dler and M. Semchenko and C. Stevens and M. Tsiafouli and O. Vilhelmsson and W. Wanek and {de Vries}, F.T.",
year = "2024",
month = dec,
day = "19",
doi = "10.1038/s41586-024-08185-3",
language = "English",
volume = "636",
pages = "690--696",
journal = "Nature",
issn = "0028-0836",
publisher = "Nature Research",
number = "8043",

}

RIS

TY - JOUR

T1 - Soil microbiomes show consistent and predictable responses to extreme events

AU - Knight, C.G.

AU - Nicolitch, O.

AU - Griffiths, R.I.

AU - Goodall, T.

AU - Jones, B.

AU - Weser, C.

AU - Langridge, H.

AU - Davison, J.

AU - Dellavalle, A.

AU - Eisenhauer, N.

AU - Gongalsky, K.B.

AU - Hector, A.

AU - Jardine, E.

AU - Kardol, P.

AU - Maestre, F.T.

AU - Schädler, M.

AU - Semchenko, M.

AU - Stevens, C.

AU - Tsiafouli, M.

AU - Vilhelmsson, O.

AU - Wanek, W.

AU - de Vries, F.T.

PY - 2024/12/19

Y1 - 2024/12/19

N2 - Increasing extreme climatic events threaten the functioning of terrestrial ecosystems . Because soil microbes govern key biogeochemical processes, understanding their response to climate extremes is crucial in predicting the consequences for ecosystem functioning . Here we subjected soils from 30 grasslands across Europe to four contrasting extreme climatic events under common controlled conditions (drought, flood, freezing and heat), and compared the response of soil microbial communities and their functioning with those of undisturbed soils. Soil microbiomes exhibited a small, but highly consistent and phylogenetically conserved, response under the imposed extreme events. Heat treatment most strongly impacted soil microbiomes, enhancing dormancy and sporulation genes and decreasing metabolic versatility. Microbiome response to heat in particular could be predicted by local climatic conditions and soil properties, with soils that do not normally experience the extreme conditions being imposed being most vulnerable. Our results suggest that soil microbiomes from different climates share unified responses to extreme climatic events, but that predicting the extent of community change may require knowledge of the local microbiome. These findings advance our understanding of soil microbial responses to extreme events, and provide a first step for making general predictions about the impact of extreme climatic events on soil functioning. [Abstract copyright: © 2024. The Author(s).]

AB - Increasing extreme climatic events threaten the functioning of terrestrial ecosystems . Because soil microbes govern key biogeochemical processes, understanding their response to climate extremes is crucial in predicting the consequences for ecosystem functioning . Here we subjected soils from 30 grasslands across Europe to four contrasting extreme climatic events under common controlled conditions (drought, flood, freezing and heat), and compared the response of soil microbial communities and their functioning with those of undisturbed soils. Soil microbiomes exhibited a small, but highly consistent and phylogenetically conserved, response under the imposed extreme events. Heat treatment most strongly impacted soil microbiomes, enhancing dormancy and sporulation genes and decreasing metabolic versatility. Microbiome response to heat in particular could be predicted by local climatic conditions and soil properties, with soils that do not normally experience the extreme conditions being imposed being most vulnerable. Our results suggest that soil microbiomes from different climates share unified responses to extreme climatic events, but that predicting the extent of community change may require knowledge of the local microbiome. These findings advance our understanding of soil microbial responses to extreme events, and provide a first step for making general predictions about the impact of extreme climatic events on soil functioning. [Abstract copyright: © 2024. The Author(s).]

KW - article

KW - climate

KW - dormancy

KW - drought

KW - freezing

KW - grassland

KW - heat treatment

KW - microbiome

KW - nonhuman

KW - prediction

KW - soil

KW - soil microflora

KW - soil property

KW - sporogenesis

U2 - 10.1038/s41586-024-08185-3

DO - 10.1038/s41586-024-08185-3

M3 - Journal article

C2 - 39604724

VL - 636

SP - 690

EP - 696

JO - Nature

JF - Nature

SN - 0028-0836

IS - 8043

M1 - 19

ER -