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An Ensemble Framework for Projecting the Impact of Lymphatic Filariasis Interventions Across Sub-Saharan Africa at a Fine Spatial Scale

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An Ensemble Framework for Projecting the Impact of Lymphatic Filariasis Interventions Across Sub-Saharan Africa at a Fine Spatial Scale. / Touloupou, Panayiota; Fronterre, Claudio; Cano, Jorge et al.
In: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, Vol. 78, No. Suppl. 2, 15.05.2024, p. S108-S116.

Research output: Contribution to Journal/MagazineJournal articlepeer-review

Harvard

Touloupou, P, Fronterre, C, Cano, J, Prada, JM, Smith, M, Kontoroupis, P, Brown, P, Rivera, RC, de Vlas, SJ, Gunawardena, S, Irvine, MA, Njenga, SM, Reimer, L, Seife, F, Sharma, S, Michael, E, Stolk, WA, Pulan, R, Spencer, SEF & Hollingsworth, TD 2024, 'An Ensemble Framework for Projecting the Impact of Lymphatic Filariasis Interventions Across Sub-Saharan Africa at a Fine Spatial Scale', Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, vol. 78, no. Suppl. 2, pp. S108-S116. https://doi.org/10.1093/cid/ciae071

APA

Touloupou, P., Fronterre, C., Cano, J., Prada, J. M., Smith, M., Kontoroupis, P., Brown, P., Rivera, R. C., de Vlas, S. J., Gunawardena, S., Irvine, M. A., Njenga, S. M., Reimer, L., Seife, F., Sharma, S., Michael, E., Stolk, W. A., Pulan, R., Spencer, S. E. F., & Hollingsworth, T. D. (2024). An Ensemble Framework for Projecting the Impact of Lymphatic Filariasis Interventions Across Sub-Saharan Africa at a Fine Spatial Scale. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 78(Suppl. 2), S108-S116. https://doi.org/10.1093/cid/ciae071

Vancouver

Touloupou P, Fronterre C, Cano J, Prada JM, Smith M, Kontoroupis P et al. An Ensemble Framework for Projecting the Impact of Lymphatic Filariasis Interventions Across Sub-Saharan Africa at a Fine Spatial Scale. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 2024 May 15;78(Suppl. 2):S108-S116. Epub 2024 Apr 1. doi: 10.1093/cid/ciae071

Author

Touloupou, Panayiota ; Fronterre, Claudio ; Cano, Jorge et al. / An Ensemble Framework for Projecting the Impact of Lymphatic Filariasis Interventions Across Sub-Saharan Africa at a Fine Spatial Scale. In: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 2024 ; Vol. 78, No. Suppl. 2. pp. S108-S116.

Bibtex

@article{4cf889fc8d73401e9cfac7208f8ca70b,
title = "An Ensemble Framework for Projecting the Impact of Lymphatic Filariasis Interventions Across Sub-Saharan Africa at a Fine Spatial Scale",
abstract = "BackgroundLymphatic filariasis (LF) is a neglected tropical disease targeted for elimination as a public health problem by 2030. Although mass treatments have led to huge reductions in LF prevalence, some countries or regions may find it difficult to achieve elimination by 2030 owing to various factors, including local differences in transmission. Subnational projections of intervention impact are a useful tool in understanding these dynamics, but correctly characterizing their uncertainty is challenging.MethodsWe developed a computationally feasible framework for providing subnational projections for LF across 44 sub-Saharan African countries using ensemble models, guided by historical control data, to allow assessment of the role of subnational heterogeneities in global goal achievement. Projected scenarios include ongoing annual treatment from 2018 to 2030, enhanced coverage, and biannual treatment.ResultsOur projections suggest that progress is likely to continue well. However, highly endemic locations currently deploying strategies with the lower World Health Organization recommended coverage (65%) and frequency (annual) are expected to have slow decreases in prevalence. Increasing intervention frequency or coverage can accelerate progress by up to 5 or 6 years, respectively.ConclusionsWhile projections based on baseline data have limitations, our methodological advancements provide assessments of potential bottlenecks for the global goals for LF arising from subnational heterogeneities. In particular, areas with high baseline prevalence may face challenges in achieving the 2030 goals, extending the {"}tail{"} of interventions. Enhancing intervention frequency and/or coverage will accelerate progress. Our approach facilitates preimplementation assessments of the impact of local interventions and is applicable to other regions and neglected tropical diseases.",
keywords = "Lymphatic Filariasis, Ensemble Models, Fine-scale Spatial Projections, Intervention Impact, Linking Maps With Models, Humans, Elephantiasis, Filarial, Filaricides, Prevalence, Africa South of the Sahara, Neglected Diseases, Disease Eradication",
author = "Panayiota Touloupou and Claudio Fronterre and Jorge Cano and Prada, {Joaquin M} and Morgan Smith and Periklis Kontoroupis and Paul Brown and Rivera, {Rocio Caja} and {de Vlas}, {Sake J} and Sharmini Gunawardena and Irvine, {Michael A} and Njenga, {Sammy M} and Lisa Reimer and Fikre Seife and Swarnali Sharma and Edwin Michael and Stolk, {Wilma A} and Rachel Pulan and Spencer, {Simon E F} and Hollingsworth, {T D{\'e}irdre}",
year = "2024",
month = may,
day = "15",
doi = "10.1093/cid/ciae071",
language = "English",
volume = "78",
pages = "S108--S116",
journal = "Clinical infectious diseases : an official publication of the Infectious Diseases Society of America",
issn = "1058-4838",
publisher = "BioMed Central",
number = "Suppl. 2",

}

RIS

TY - JOUR

T1 - An Ensemble Framework for Projecting the Impact of Lymphatic Filariasis Interventions Across Sub-Saharan Africa at a Fine Spatial Scale

AU - Touloupou, Panayiota

AU - Fronterre, Claudio

AU - Cano, Jorge

AU - Prada, Joaquin M

AU - Smith, Morgan

AU - Kontoroupis, Periklis

AU - Brown, Paul

AU - Rivera, Rocio Caja

AU - de Vlas, Sake J

AU - Gunawardena, Sharmini

AU - Irvine, Michael A

AU - Njenga, Sammy M

AU - Reimer, Lisa

AU - Seife, Fikre

AU - Sharma, Swarnali

AU - Michael, Edwin

AU - Stolk, Wilma A

AU - Pulan, Rachel

AU - Spencer, Simon E F

AU - Hollingsworth, T Déirdre

PY - 2024/5/15

Y1 - 2024/5/15

N2 - BackgroundLymphatic filariasis (LF) is a neglected tropical disease targeted for elimination as a public health problem by 2030. Although mass treatments have led to huge reductions in LF prevalence, some countries or regions may find it difficult to achieve elimination by 2030 owing to various factors, including local differences in transmission. Subnational projections of intervention impact are a useful tool in understanding these dynamics, but correctly characterizing their uncertainty is challenging.MethodsWe developed a computationally feasible framework for providing subnational projections for LF across 44 sub-Saharan African countries using ensemble models, guided by historical control data, to allow assessment of the role of subnational heterogeneities in global goal achievement. Projected scenarios include ongoing annual treatment from 2018 to 2030, enhanced coverage, and biannual treatment.ResultsOur projections suggest that progress is likely to continue well. However, highly endemic locations currently deploying strategies with the lower World Health Organization recommended coverage (65%) and frequency (annual) are expected to have slow decreases in prevalence. Increasing intervention frequency or coverage can accelerate progress by up to 5 or 6 years, respectively.ConclusionsWhile projections based on baseline data have limitations, our methodological advancements provide assessments of potential bottlenecks for the global goals for LF arising from subnational heterogeneities. In particular, areas with high baseline prevalence may face challenges in achieving the 2030 goals, extending the "tail" of interventions. Enhancing intervention frequency and/or coverage will accelerate progress. Our approach facilitates preimplementation assessments of the impact of local interventions and is applicable to other regions and neglected tropical diseases.

AB - BackgroundLymphatic filariasis (LF) is a neglected tropical disease targeted for elimination as a public health problem by 2030. Although mass treatments have led to huge reductions in LF prevalence, some countries or regions may find it difficult to achieve elimination by 2030 owing to various factors, including local differences in transmission. Subnational projections of intervention impact are a useful tool in understanding these dynamics, but correctly characterizing their uncertainty is challenging.MethodsWe developed a computationally feasible framework for providing subnational projections for LF across 44 sub-Saharan African countries using ensemble models, guided by historical control data, to allow assessment of the role of subnational heterogeneities in global goal achievement. Projected scenarios include ongoing annual treatment from 2018 to 2030, enhanced coverage, and biannual treatment.ResultsOur projections suggest that progress is likely to continue well. However, highly endemic locations currently deploying strategies with the lower World Health Organization recommended coverage (65%) and frequency (annual) are expected to have slow decreases in prevalence. Increasing intervention frequency or coverage can accelerate progress by up to 5 or 6 years, respectively.ConclusionsWhile projections based on baseline data have limitations, our methodological advancements provide assessments of potential bottlenecks for the global goals for LF arising from subnational heterogeneities. In particular, areas with high baseline prevalence may face challenges in achieving the 2030 goals, extending the "tail" of interventions. Enhancing intervention frequency and/or coverage will accelerate progress. Our approach facilitates preimplementation assessments of the impact of local interventions and is applicable to other regions and neglected tropical diseases.

KW - Lymphatic Filariasis

KW - Ensemble Models

KW - Fine-scale Spatial Projections

KW - Intervention Impact

KW - Linking Maps With Models

KW - Humans

KW - Elephantiasis, Filarial

KW - Filaricides

KW - Prevalence

KW - Africa South of the Sahara

KW - Neglected Diseases

KW - Disease Eradication

U2 - 10.1093/cid/ciae071

DO - 10.1093/cid/ciae071

M3 - Journal article

VL - 78

SP - S108-S116

JO - Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

JF - Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

SN - 1058-4838

IS - Suppl. 2

ER -