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Characterization of Putative Stem Cell Populations in the Cornea Using Synchrotron Infrared Microspectroscopy.

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Characterization of Putative Stem Cell Populations in the Cornea Using Synchrotron Infrared Microspectroscopy. / German, Matthew J.; Pollock, Hubert M.; Zhao, Bojun et al.
In: Investigative Ophthalmology and Visual Science, Vol. 47, No. 6, 06.2006, p. 2417-2421.

Research output: Contribution to Journal/MagazineJournal articlepeer-review

Harvard

German, MJ, Pollock, HM, Zhao, B, Tobin, MJ, Hammiche, A, Bentley, A, Cooper, LJ, Martin, FL & Fullwood, NJ 2006, 'Characterization of Putative Stem Cell Populations in the Cornea Using Synchrotron Infrared Microspectroscopy.', Investigative Ophthalmology and Visual Science, vol. 47, no. 6, pp. 2417-2421. https://doi.org/10.1167/iovs.05-1254

APA

German, M. J., Pollock, H. M., Zhao, B., Tobin, M. J., Hammiche, A., Bentley, A., Cooper, L. J., Martin, F. L., & Fullwood, N. J. (2006). Characterization of Putative Stem Cell Populations in the Cornea Using Synchrotron Infrared Microspectroscopy. Investigative Ophthalmology and Visual Science, 47(6), 2417-2421. https://doi.org/10.1167/iovs.05-1254

Vancouver

German MJ, Pollock HM, Zhao B, Tobin MJ, Hammiche A, Bentley A et al. Characterization of Putative Stem Cell Populations in the Cornea Using Synchrotron Infrared Microspectroscopy. Investigative Ophthalmology and Visual Science. 2006 Jun;47(6):2417-2421. doi: 10.1167/iovs.05-1254

Author

German, Matthew J. ; Pollock, Hubert M. ; Zhao, Bojun et al. / Characterization of Putative Stem Cell Populations in the Cornea Using Synchrotron Infrared Microspectroscopy. In: Investigative Ophthalmology and Visual Science. 2006 ; Vol. 47, No. 6. pp. 2417-2421.

Bibtex

@article{36f8a6c8b21b4eee8257772ec44f8e7f,
title = "Characterization of Putative Stem Cell Populations in the Cornea Using Synchrotron Infrared Microspectroscopy.",
abstract = "PURPOSE. High-resolution synchrotron radiation-based Fourier transform infrared (SR-FTIR) microspectroscopy coupled with multivariate analysis was used to investigate the characteristics of putative adult stem cell (SC), transiently amplified (TA) cell, and terminally differentiated (TD) cell populations of the corneal epithelium. METHODS. Spectra of individual cells in situ in cryosections of bovine cornea were collected by using a synchrotron microspectroscopy facility at Daresbury Laboratory (United Kingdom). The resultant spectra were analyzed by multivariate analysis. RESULTS. The median spectra of the three different cell populations showed marked differences, which correlated with their degree of differentiation and proliferative capacity. Multivariate (principal component) analysis (PCA) showed that the three cell populations could be segregated into discrete clusters, with only a slight overlap between the SC and TA cell populations. Further analysis (Mann-Whitney test) indicated that the most significant (P < 0.001) spectral differences between the SC and TA cell populations were chiefly associated with changes in nucleic acid conformation. CONCLUSIONS. SR-FTIR microspectroscopy coupled with PCA appears to enable the identification of SC, TA cell, and TD cell populations. The results also suggest that a small subpopulation of cells in the corneal epithelial SC niche possess TA cell-like characteristics. The most significant spectral characteristics associated with the SCs appear to relate to differences in nucleic acid conformation. This finding is consistent with recent theories suggesting that the control of differentiation is related to major changes in chromatin structure.",
author = "German, {Matthew J.} and Pollock, {Hubert M.} and Bojun Zhao and Tobin, {Mark J.} and Azzedine Hammiche and Adam Bentley and Cooper, {Leanne J.} and Martin, {Francis L.} and Fullwood, {Nigel J.}",
year = "2006",
month = jun,
doi = "10.1167/iovs.05-1254",
language = "English",
volume = "47",
pages = "2417--2421",
journal = "Investigative Ophthalmology and Visual Science",
issn = "1552-5783",
publisher = "ASSOC RESEARCH VISION OPHTHALMOLOGY INC",
number = "6",

}

RIS

TY - JOUR

T1 - Characterization of Putative Stem Cell Populations in the Cornea Using Synchrotron Infrared Microspectroscopy.

AU - German, Matthew J.

AU - Pollock, Hubert M.

AU - Zhao, Bojun

AU - Tobin, Mark J.

AU - Hammiche, Azzedine

AU - Bentley, Adam

AU - Cooper, Leanne J.

AU - Martin, Francis L.

AU - Fullwood, Nigel J.

PY - 2006/6

Y1 - 2006/6

N2 - PURPOSE. High-resolution synchrotron radiation-based Fourier transform infrared (SR-FTIR) microspectroscopy coupled with multivariate analysis was used to investigate the characteristics of putative adult stem cell (SC), transiently amplified (TA) cell, and terminally differentiated (TD) cell populations of the corneal epithelium. METHODS. Spectra of individual cells in situ in cryosections of bovine cornea were collected by using a synchrotron microspectroscopy facility at Daresbury Laboratory (United Kingdom). The resultant spectra were analyzed by multivariate analysis. RESULTS. The median spectra of the three different cell populations showed marked differences, which correlated with their degree of differentiation and proliferative capacity. Multivariate (principal component) analysis (PCA) showed that the three cell populations could be segregated into discrete clusters, with only a slight overlap between the SC and TA cell populations. Further analysis (Mann-Whitney test) indicated that the most significant (P < 0.001) spectral differences between the SC and TA cell populations were chiefly associated with changes in nucleic acid conformation. CONCLUSIONS. SR-FTIR microspectroscopy coupled with PCA appears to enable the identification of SC, TA cell, and TD cell populations. The results also suggest that a small subpopulation of cells in the corneal epithelial SC niche possess TA cell-like characteristics. The most significant spectral characteristics associated with the SCs appear to relate to differences in nucleic acid conformation. This finding is consistent with recent theories suggesting that the control of differentiation is related to major changes in chromatin structure.

AB - PURPOSE. High-resolution synchrotron radiation-based Fourier transform infrared (SR-FTIR) microspectroscopy coupled with multivariate analysis was used to investigate the characteristics of putative adult stem cell (SC), transiently amplified (TA) cell, and terminally differentiated (TD) cell populations of the corneal epithelium. METHODS. Spectra of individual cells in situ in cryosections of bovine cornea were collected by using a synchrotron microspectroscopy facility at Daresbury Laboratory (United Kingdom). The resultant spectra were analyzed by multivariate analysis. RESULTS. The median spectra of the three different cell populations showed marked differences, which correlated with their degree of differentiation and proliferative capacity. Multivariate (principal component) analysis (PCA) showed that the three cell populations could be segregated into discrete clusters, with only a slight overlap between the SC and TA cell populations. Further analysis (Mann-Whitney test) indicated that the most significant (P < 0.001) spectral differences between the SC and TA cell populations were chiefly associated with changes in nucleic acid conformation. CONCLUSIONS. SR-FTIR microspectroscopy coupled with PCA appears to enable the identification of SC, TA cell, and TD cell populations. The results also suggest that a small subpopulation of cells in the corneal epithelial SC niche possess TA cell-like characteristics. The most significant spectral characteristics associated with the SCs appear to relate to differences in nucleic acid conformation. This finding is consistent with recent theories suggesting that the control of differentiation is related to major changes in chromatin structure.

U2 - 10.1167/iovs.05-1254

DO - 10.1167/iovs.05-1254

M3 - Journal article

VL - 47

SP - 2417

EP - 2421

JO - Investigative Ophthalmology and Visual Science

JF - Investigative Ophthalmology and Visual Science

SN - 1552-5783

IS - 6

ER -