Complete genome analysis of an avian paramyxovirus type 1 strain isolated in 1994 from an asymptomatic black-headed gull (Larus ridibundus) in southern Sweden

Biomedical and Life Sciences

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https://doi.org/10.1637/9086-092409-RESNOTE.1
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Keywords

Amino Acid Sequence, Animals, Base Sequence, Charadriiformes, Gene Expression Regulation, Viral, Genome, Viral, Newcastle Disease, Newcastle disease virus, Phylogeny, Sweden, Viral Proteins, Journal Article, Research Support, Non-U.S. Gov't

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Complete genome analysis of an avian paramyxovirus type 1 strain isolated in 1994 from an asymptomatic black-headed gull (Larus ridibundus) in southern Sweden. / Munir, Muhammad; Linde, Anna-Malin; Zohari, Siamak et al.
In: Avian Diseases, Vol. 54, No. 2, 06.2010, p. 923-930.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Bibtex

@article{7cf65cb4bffe4fabb74a6f184279cbbc,

title = "Complete genome analysis of an avian paramyxovirus type 1 strain isolated in 1994 from an asymptomatic black-headed gull (Larus ridibundus) in southern Sweden",

abstract = "The complete genome sequence of an avian paramyxovirus serotype 1 (APMV-1) isolated from a black-headed gull (Larus ridibundus) in Sweden was determined and compared with other APMV-1 sequences. Sequence analyses showed that this isolate consists of six genes in the order 3'-NP-P-M-F-HN-L-5', is 15,186 nucleotides long, and contains a typical, avirulent fusion protein cleavage site. It was also shown to have a hemagglutinin-neuraminidase protein with a length of 585 amino acids (aa) instead of the expected 616 aa. Phylogenetic analyses showed that the isolate belongs to genotype I, and the relationship with some other, known APMV-1 virus sequences was revealed. Waterfowl have been considered to act as a reservoir for APMV-1 and, therefore, it is important to broaden the knowledge of viruses circulating within this population.",

keywords = "Amino Acid Sequence, Animals, Base Sequence, Charadriiformes, Gene Expression Regulation, Viral, Genome, Viral, Newcastle Disease, Newcastle disease virus, Phylogeny, Sweden, Viral Proteins, Journal Article, Research Support, Non-U.S. Gov't",

author = "Muhammad Munir and Anna-Malin Linde and Siamak Zohari and Karl St{\aa}hl and Claudia Baule and Kerstin Holm and Bj{\"o}rn Engstr{\"o}m and Mikael Berg",

year = "2010",

month = jun,

doi = "10.1637/9086-092409-RESNOTE.1",

language = "English",

volume = "54",

pages = "923--930",

journal = "Avian Diseases",

issn = "0005-2086",

publisher = "American Association of Avian Pathologists",

number = "2",

}

RIS

TY - JOUR

T1 - Complete genome analysis of an avian paramyxovirus type 1 strain isolated in 1994 from an asymptomatic black-headed gull (Larus ridibundus) in southern Sweden

AU - Munir, Muhammad

AU - Linde, Anna-Malin

AU - Zohari, Siamak

AU - Ståhl, Karl

AU - Baule, Claudia

AU - Holm, Kerstin

AU - Engström, Björn

AU - Berg, Mikael

PY - 2010/6

Y1 - 2010/6

N2 - The complete genome sequence of an avian paramyxovirus serotype 1 (APMV-1) isolated from a black-headed gull (Larus ridibundus) in Sweden was determined and compared with other APMV-1 sequences. Sequence analyses showed that this isolate consists of six genes in the order 3'-NP-P-M-F-HN-L-5', is 15,186 nucleotides long, and contains a typical, avirulent fusion protein cleavage site. It was also shown to have a hemagglutinin-neuraminidase protein with a length of 585 amino acids (aa) instead of the expected 616 aa. Phylogenetic analyses showed that the isolate belongs to genotype I, and the relationship with some other, known APMV-1 virus sequences was revealed. Waterfowl have been considered to act as a reservoir for APMV-1 and, therefore, it is important to broaden the knowledge of viruses circulating within this population.

AB - The complete genome sequence of an avian paramyxovirus serotype 1 (APMV-1) isolated from a black-headed gull (Larus ridibundus) in Sweden was determined and compared with other APMV-1 sequences. Sequence analyses showed that this isolate consists of six genes in the order 3'-NP-P-M-F-HN-L-5', is 15,186 nucleotides long, and contains a typical, avirulent fusion protein cleavage site. It was also shown to have a hemagglutinin-neuraminidase protein with a length of 585 amino acids (aa) instead of the expected 616 aa. Phylogenetic analyses showed that the isolate belongs to genotype I, and the relationship with some other, known APMV-1 virus sequences was revealed. Waterfowl have been considered to act as a reservoir for APMV-1 and, therefore, it is important to broaden the knowledge of viruses circulating within this population.

KW - Amino Acid Sequence

KW - Animals

KW - Base Sequence

KW - Charadriiformes

KW - Gene Expression Regulation, Viral

KW - Genome, Viral

KW - Newcastle Disease

KW - Newcastle disease virus

KW - Phylogeny

KW - Sweden

KW - Viral Proteins

KW - Journal Article

KW - Research Support, Non-U.S. Gov't

U2 - 10.1637/9086-092409-RESNOTE.1

DO - 10.1637/9086-092409-RESNOTE.1

M3 - Journal article

C2 - 20608541

VL - 54

SP - 923

EP - 930

JO - Avian Diseases

JF - Avian Diseases

SN - 0005-2086

IS - 2

ER -

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