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LGAAP: Leishmaniinae Genome Assembly and Annotation Pipeline

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Article numbere0043921
<mark>Journal publication date</mark>22/07/2021
<mark>Journal</mark>Microbiology Resource Announcements
Issue number29
Volume10
Number of pages5
Publication StatusPublished
<mark>Original language</mark>English

Abstract

We present the LGAAP computational pipeline, which was successfully used to assemble six genomes of the parasite subfamily Leishmaniinae to chromosome-scale completeness from a combination of long- and short-read sequencing data. LGAAP is open source, and we suggest that it may easily be ported for assembly of any genome of comparable size (∼35 Mb).