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Machine learning to mechanically assess 2D and 3D biomimetic electrospun scaffolds for tissue engineering applications: Between the predictability and the interpretability

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Machine learning to mechanically assess 2D and 3D biomimetic electrospun scaffolds for tissue engineering applications: Between the predictability and the interpretability. / Roldán, Elisa; Reeves, Neil D; Cooper, Glen et al.
In: Journal of the mechanical behavior of biomedical materials, Vol. 157, 106630, 30.09.2024.

Research output: Contribution to Journal/MagazineJournal articlepeer-review

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Roldán E, Reeves ND, Cooper G, Andrews K. Machine learning to mechanically assess 2D and 3D biomimetic electrospun scaffolds for tissue engineering applications: Between the predictability and the interpretability. Journal of the mechanical behavior of biomedical materials. 2024 Sept 30;157:106630. Epub 2024 Jun 17. doi: 10.1016/j.jmbbm.2024.106630

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@article{850cacf4bf914cee8ae3488f3884a91f,
title = "Machine learning to mechanically assess 2D and 3D biomimetic electrospun scaffolds for tissue engineering applications: Between the predictability and the interpretability",
abstract = "Currently, the use of autografts is the gold standard for the replacement of many damaged biological tissues. However, this practice presents disadvantages that can be mitigated through tissue-engineered implants. The aim of this study is to explore how machine learning can mechanically evaluate 2D and 3D polyvinyl alcohol (PVA) electrospun scaffolds (one twisted filament, 3 twisted filament and 3 twisted/braided filament scaffolds) for their use in different tissue engineering applications. Crosslinked and non-crosslinked scaffolds were fabricated and mechanically characterised, in dry/wet conditions and under longitudinal/transverse loading, using tensile testing. 28 machine learning models (ML) were used to predict the mechanical properties of the scaffolds. 4 exogenous variables (structure, environmental condition, crosslinking and direction of the load) were used to predict 2 endogenous variables (Young's modulus and ultimate tensile strength). ML models were able to identify 6 structures and testing conditions with comparable Young's modulus and ultimate tensile strength to ligamentous tissue, skin tissue, oral and nasal tissue, and renal tissue. This novel study proved that Classification and Regression Trees (CART) models were an innovative and easy to interpret tool to identify biomimetic electrospun structures; however, Cubist and Support Vector Machine (SVM) models were the most accurate, with R 2 of 0.93 and 0.8, to predict the ultimate tensile strength and Young's modulus, respectively. This approach can be implemented to optimise the manufacturing process in different applications. ",
keywords = "Human tissue, Mechanical characterisation, Electrospinning, Biomimetic scaffolds, Tissue engineered implants, Machine learning, Decision trees, Ligament, PVA",
author = "Elisa Rold{\'a}n and Reeves, {Neil D} and Glen Cooper and Kirstie Andrews",
year = "2024",
month = sep,
day = "30",
doi = "10.1016/j.jmbbm.2024.106630",
language = "English",
volume = "157",
journal = "Journal of the mechanical behavior of biomedical materials",
issn = "1878-0180",
publisher = "Elsevier Ltd",

}

RIS

TY - JOUR

T1 - Machine learning to mechanically assess 2D and 3D biomimetic electrospun scaffolds for tissue engineering applications

T2 - Between the predictability and the interpretability

AU - Roldán, Elisa

AU - Reeves, Neil D

AU - Cooper, Glen

AU - Andrews, Kirstie

PY - 2024/9/30

Y1 - 2024/9/30

N2 - Currently, the use of autografts is the gold standard for the replacement of many damaged biological tissues. However, this practice presents disadvantages that can be mitigated through tissue-engineered implants. The aim of this study is to explore how machine learning can mechanically evaluate 2D and 3D polyvinyl alcohol (PVA) electrospun scaffolds (one twisted filament, 3 twisted filament and 3 twisted/braided filament scaffolds) for their use in different tissue engineering applications. Crosslinked and non-crosslinked scaffolds were fabricated and mechanically characterised, in dry/wet conditions and under longitudinal/transverse loading, using tensile testing. 28 machine learning models (ML) were used to predict the mechanical properties of the scaffolds. 4 exogenous variables (structure, environmental condition, crosslinking and direction of the load) were used to predict 2 endogenous variables (Young's modulus and ultimate tensile strength). ML models were able to identify 6 structures and testing conditions with comparable Young's modulus and ultimate tensile strength to ligamentous tissue, skin tissue, oral and nasal tissue, and renal tissue. This novel study proved that Classification and Regression Trees (CART) models were an innovative and easy to interpret tool to identify biomimetic electrospun structures; however, Cubist and Support Vector Machine (SVM) models were the most accurate, with R 2 of 0.93 and 0.8, to predict the ultimate tensile strength and Young's modulus, respectively. This approach can be implemented to optimise the manufacturing process in different applications.

AB - Currently, the use of autografts is the gold standard for the replacement of many damaged biological tissues. However, this practice presents disadvantages that can be mitigated through tissue-engineered implants. The aim of this study is to explore how machine learning can mechanically evaluate 2D and 3D polyvinyl alcohol (PVA) electrospun scaffolds (one twisted filament, 3 twisted filament and 3 twisted/braided filament scaffolds) for their use in different tissue engineering applications. Crosslinked and non-crosslinked scaffolds were fabricated and mechanically characterised, in dry/wet conditions and under longitudinal/transverse loading, using tensile testing. 28 machine learning models (ML) were used to predict the mechanical properties of the scaffolds. 4 exogenous variables (structure, environmental condition, crosslinking and direction of the load) were used to predict 2 endogenous variables (Young's modulus and ultimate tensile strength). ML models were able to identify 6 structures and testing conditions with comparable Young's modulus and ultimate tensile strength to ligamentous tissue, skin tissue, oral and nasal tissue, and renal tissue. This novel study proved that Classification and Regression Trees (CART) models were an innovative and easy to interpret tool to identify biomimetic electrospun structures; however, Cubist and Support Vector Machine (SVM) models were the most accurate, with R 2 of 0.93 and 0.8, to predict the ultimate tensile strength and Young's modulus, respectively. This approach can be implemented to optimise the manufacturing process in different applications.

KW - Human tissue

KW - Mechanical characterisation

KW - Electrospinning

KW - Biomimetic scaffolds

KW - Tissue engineered implants

KW - Machine learning

KW - Decision trees

KW - Ligament

KW - PVA

U2 - 10.1016/j.jmbbm.2024.106630

DO - 10.1016/j.jmbbm.2024.106630

M3 - Journal article

C2 - 38896922

VL - 157

JO - Journal of the mechanical behavior of biomedical materials

JF - Journal of the mechanical behavior of biomedical materials

SN - 1878-0180

M1 - 106630

ER -