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Research

Dr Derek Gatherer

Lecturer

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  1. Journal article
  2. Published

    RNA-Seq analysis of differentiated keratinocytes reveals a massive response to late events during human papillomavirus type 16 infection, including loss of epithelial barrier function

    Klymenko, T., Gu, Q., Herbert, I., Stevenson, A., Iliev, V., Watkins, G., Pollock, C., Bhatia, R., Cuschieri, K., Herzyk, P., Gatherer, D. & Graham, S. V., 12/2017, In: Journal of Virology. 91, 24, p. e-1001-17 17 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  3. Published

    In silico design of knowledge-based Plasmodium falciparum epitope ensemble vaccines

    Damfo, S. A., Reche, P., Gatherer, D. & Flower, D. R., 11/2017, In: Journal of Molecular Graphics and Modelling. 78, p. 195-205 11 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  4. Published

    Nasopharyngeal metagenomic deep sequencing data, Lancaster, UK, 2014-2015

    Atkinson, K. V., Bishop, L. A., Rhodes, G., Salez, N., McEwan, N. R., Hegarty, M. J., Robey, J., Harding, N., Wetherell, S., Lauder, R. M., Pickup, R. W., Wilkinson, M. & Gatherer, D., 24/10/2017, In: Scientific Data. 4, 7 p., 170161.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  5. Published

    Genome Sequence of Human Papillomavirus Type 20, Strain HPV-20/Lancaster/2015

    Atkinson, K., Bishop, L. A., Rhodes, G., Salez, N., McEwan, N. R., Hegarty, M. J., Robey, J., Harding, N., Wetherell, S., Lauder, R. M., Pickup, R. W., Wilkinson, M. & Gatherer, D., 3/08/2017, In: Genome Announcements. 5, 31, p. e00712-17 6 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  6. Published

    Emerging viruses - Is there an emerging pattern?

    Gatherer, D., 1/06/2017, In: Biochemist. 39, 3, p. 4-7 4 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  7. Published

    Genome Sequence of Human Papillomavirus 23 Strain HPV-23/Lancaster/2015

    Atkinson, K. V., Bishop, L. A., Rhodes, G., Salez, N., McEwan, N. R., Hegarty, M. J., Robey, J., Harding, N., Wetherell, S., Lauder, R. M., Pickup, R. W., Wilkinson, M. & Gatherer, D., 18/05/2017, In: Genome Announcements. 5, 20, 2 p., e00257-17.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  8. Published

    Influenza C in Lancaster, UK, in the winter of 2014-2015

    Atkinson, K. V., Bishop, L. A., Rhodes, G., Salez, N., McEwan, N. R., Hegarty, M. J., Robey, J., Harding, N., Wetherell, S., Lauder, R. M., Pickup, R. W., Wilkinson, M. & Gatherer, D., 13/04/2017, In: Scientific Reports. 7, 9 p., 46578.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  9. Published

    Genome sequence of human rhinovirus A22, strain Lancaster/2015

    Atkinson, K. V., Bishop, L. A., Rhodes, G., Salez, N., McEwan, N. R., Hegarty, M. J., Robey, J., Harding, N., Wetherell, S., Lauder, R. M., Pickup, R. W., Wilkinson, M. & Gatherer, D., 23/03/2017, In: Genome Announcements. 5, 12

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  10. Published

    Conserved fever pathways across vertebrates: a herpesvirus expressed decoy TNF-α receptor delays behavioral fever in fish

    Rakus, K., Ronsmans, M., Forlenza, M., Boutier, M., Piazzon, M. C., Jazowiecka-Rakus, J., Gatherer, D., Athanasiadis, A., Farnir, F., Davison, A. J., Boudinot, P., Michiels, T., Wiegertjes, G. F. & Vanderplasschen, A., 8/02/2017, In: Cell Host and Microbe. 21, 2, p. 244-253 10 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  11. Published

    The serology of Ebolavirus - a wider geographical range, a wider genus of viruses, or a wider range of virulence?

    Formella, M. & Gatherer, D., 12/2016, In: Journal of General Virology. 97, 12, p. 3120-3130 11 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  12. Published

    Rosen's (M,R) system as an X-machine

    Palmer, M. L., Williams, R. A. & Gatherer, D., 7/11/2016, In: Journal of Theoretical Biology. 408, p. 97-104 8 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  13. Published

    Towards the knowledge-based design of universal influenza epitope ensemble vaccines

    Sheikh, Q. M., Gatherer, D., Reche, P. A. & Flower, D. R., 1/11/2016, In: Bioinformatics. 32, 21, p. 3233-3239 7 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  14. Published

    Identification of important amino acid replacements in the 2013-2016 Ebola virus outbreak

    Olabode, A., Gatherer, D., Jiang, X., Matthews, D., Hiscox, J., Gunther, S., Carroll, M., Lovell, S. & Robertson, D., 14/09/2016, In: Biorxiv.

    Research output: Contribution to Journal/Magazine › Journal article

  15. Published

    Tempus et Locus: a tool for extracting precisely dated viral sequences from GenBank, and its application to the phylogenetics of primate erythroparvovirus 1 (B19V)

    Carter, A. R. & Gatherer, D., 4/07/2016, In: Biorxiv. 2016, 13 p.

    Research output: Contribution to Journal/Magazine › Journal article

  16. Published

    Viral forensic genomics reveals the relatedness of classic herpes simplex virus strains KOS, KOS63, and KOS79

    Bowen, C. D., Renner, D. W., Shreve, J. T., Tafuri, Y., Payne, K. M., Dix, R. D., Kinchington, P. R., Gatherer, D. & Szpara, M. L., 05/2016, In: Virology. 492, p. 179-186 8 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  17. Published

    Zika virus: a previously slow pandemic spreads rapidly through the Americas

    Gatherer, D. & Kohl, A., 1/02/2016, In: Journal of General Virology. 97, 2, p. 269-273 5 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  18. Published

    Rosen's (M,R) system in Unified Modelling Language

    Zhang, L., Williams, R. & Gatherer, D., 01/2016, In: BioSystems. 139, p. 29-36 8 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  19. Published

    The genome of a tortoise herpesvirus (testudinid herpesvirus 3) has a novel structure and contains a large region that is not required for replication in vitro or virulence in vivo

    Gandar, F., Wilkie, G. S., Gatherer, D., Kerr, K., Marlier, D., Diez, M., Marschang, R. E., Mast, J., Dewals, B. G., Davison, A. J. & Vanderplasschen, A. F. C., 11/2015, In: Journal of Virology. 89, 22, p. 11438-11456 19 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  20. Published

    Viral genotype correlates with distinct liver gene transcription signatures in chronic hepatitis C virus infection

    Robinson, M. W., Aranday-Cortes, E., Gatherer, D., Swann, R., Liefhebber, J. M. P., Filipe, A. D. S., Sigruener, A., Barclay, S. T., Mills, P. R., Patel, A. H. & McLauchlan, J., 10/2015, In: Liver International. 35, 10, p. 2256-2264 9 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  21. Published

    Sequence-independent characterization of viruses based on the pattern of viral small RNAs produced by the host

    Aguiar, E. R. G. R., Olmo, R. P., Paro, S., Ferreira, F. V., de Faria, I. J. D. S., Todjro, Y. M. H., Lobo, F. P., Kroon, E. G., Meignin, C., Gatherer, D., Imler, J-L. & Marques, J. T., 3/06/2015, In: Nucleic Acids Research. 43, 13, p. 6191–6206 16 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  22. Published

    The unprecedented scale of the West African Ebola virus disease outbreak is due to environmental and sociological factors, not special attributes of the currently circulating strain of the virus

    Gatherer, D., 02/2015, In: Evidence Based Medicine. 20, 1, p. 28 1 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  23. Published

    An N-terminal extension to the hepatitis B virus core protein forms a poorly ordered trimeric spike in assembled virus-like particles

    McGonigle, R., Yap, W. B., Ong, S. T., Gatherer, D., Bakker, S. E., Tan, W. S. & Bhella, D., 02/2015, In: Journal of Structural Biology. 189, 2, p. 73-80 8 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  24. Published

    Modelling the structure of full-length Epstein-Barr virus nuclear antigen 1

    Hussain, M., Gatherer, D. & Wilson, J. B., 12/2014, In: Virus Genes. 49, 3, p. 358-372 15 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  25. Published

    The 2014 Ebola virus disease outbreak in West Africa

    Gatherer, D., 08/2014, In: Journal of General Virology. 95, 8, p. 1619-1624 6 p.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

  26. Published

    Non-random escape pathways from a broadly neutralizing human monoclonal antibody map to a highly conserved region on the hepatitis C virus E2 glycoprotein encompassing amino acids 412-423

    Keck, Z-Y., Angus, A. G. N., Wang, W., Lau, P., Wang, Y., Gatherer, D., Patel, A. H. & Foung, S. K. H., 08/2014, In: PLoS Pathogens. 10, 8, 13 p., e1004297.

    Research output: Contribution to Journal/Magazine › Journal article › peer-review

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