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A geospatial analysis of local intermediate snail host distributions provides insight into schistosomiasis risk within under-sampled areas of southern Lake Malawi

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A geospatial analysis of local intermediate snail host distributions provides insight into schistosomiasis risk within under-sampled areas of southern Lake Malawi. / Reed, Amber L.; Al-Harbi, Mohammad H.; Makaula, Peter et al.
In: Parasites & vectors, Vol. 17, No. 1, 272, 27.06.2024.

Research output: Contribution to Journal/MagazineJournal articlepeer-review

Harvard

Reed, AL, Al-Harbi, MH, Makaula, P, Condemine, C, Hesketh, J, Archer, J, Jones, S, Kayuni, SA, Musaya, J, Stanton, MC, Stothard, JR, Fronterre, C & Jewell, C 2024, 'A geospatial analysis of local intermediate snail host distributions provides insight into schistosomiasis risk within under-sampled areas of southern Lake Malawi', Parasites & vectors, vol. 17, no. 1, 272. https://doi.org/10.1186/s13071-024-06353-y

APA

Reed, A. L., Al-Harbi, M. H., Makaula, P., Condemine, C., Hesketh, J., Archer, J., Jones, S., Kayuni, S. A., Musaya, J., Stanton, M. C., Stothard, J. R., Fronterre, C., & Jewell, C. (2024). A geospatial analysis of local intermediate snail host distributions provides insight into schistosomiasis risk within under-sampled areas of southern Lake Malawi. Parasites & vectors, 17(1), Article 272. https://doi.org/10.1186/s13071-024-06353-y

Vancouver

Reed AL, Al-Harbi MH, Makaula P, Condemine C, Hesketh J, Archer J et al. A geospatial analysis of local intermediate snail host distributions provides insight into schistosomiasis risk within under-sampled areas of southern Lake Malawi. Parasites & vectors. 2024 Jun 27;17(1):272. doi: 10.1186/s13071-024-06353-y

Author

Reed, Amber L. ; Al-Harbi, Mohammad H. ; Makaula, Peter et al. / A geospatial analysis of local intermediate snail host distributions provides insight into schistosomiasis risk within under-sampled areas of southern Lake Malawi. In: Parasites & vectors. 2024 ; Vol. 17, No. 1.

Bibtex

@article{9b9fec3858c84bfaa628159e2fc060c3,
title = "A geospatial analysis of local intermediate snail host distributions provides insight into schistosomiasis risk within under-sampled areas of southern Lake Malawi",
abstract = "Background: Along the southern shoreline of Lake Malawi, the incidence of schistosomiasis is increasing with snails of the genera Bulinus and Biomphalaria transmitting urogenital and intestinal schistosomiasis, respectively. Since the underlying distribution of snails is partially known, often being focal, developing pragmatic spatial models that interpolate snail information across under-sampled regions is required to understand and assess current and future risk of schistosomiasis. Methods: A secondary geospatial analysis of recently collected malacological and environmental survey data was undertaken. Using a Bayesian Poisson latent Gaussian process model, abundance data were fitted for Bulinus and Biomphalaria. Interpolating the abundance of snails along the shoreline (given their relative distance along the shoreline) was achieved by smoothing, using extracted environmental rainfall, land surface temperature (LST), evapotranspiration, normalised difference vegetation index (NDVI) and soil type covariate data for all predicted locations. Our adopted model used a combination of two-dimensional (2D) and one dimensional (1D) mapping. Results: A significant association between normalised difference vegetation index (NDVI) and abundance of Bulinus spp. was detected (log risk ratio − 0.83, 95% CrI − 1.57, − 0.09). A qualitatively similar association was found between NDVI and Biomphalaria sp. but was not statistically significant (log risk ratio − 1.42, 95% CrI − 3.09, 0.10). Analyses of all other environmental data were considered non-significant. Conclusions: The spatial range in which interpolation of snail distributions is possible appears < 10km owing to fine-scale biotic and abiotic heterogeneities. The forthcoming challenge is to refine geospatial sampling frameworks with future opportunities to map schistosomiasis within actual or predicted snail distributions. In so doing, this would better reveal local environmental transmission possibilities. Graphical Abstract:",
keywords = "Bayesian multilevel models, Geospatial analysis, Snail abundance, Gaussian latent process, Remote sensing, Bulinus, Biomphalaria",
author = "Reed, {Amber L.} and Al-Harbi, {Mohammad H.} and Peter Makaula and Charlotte Condemine and Josie Hesketh and John Archer and Sam Jones and Kayuni, {Sekeleghe A.} and Janelisa Musaya and Stanton, {Michelle C.} and Stothard, {J. Russell} and Claudio Fronterre and Christopher Jewell",
year = "2024",
month = jun,
day = "27",
doi = "10.1186/s13071-024-06353-y",
language = "English",
volume = "17",
journal = "Parasites & vectors",
issn = "1756-3305",
publisher = "BioMed Central",
number = "1",

}

RIS

TY - JOUR

T1 - A geospatial analysis of local intermediate snail host distributions provides insight into schistosomiasis risk within under-sampled areas of southern Lake Malawi

AU - Reed, Amber L.

AU - Al-Harbi, Mohammad H.

AU - Makaula, Peter

AU - Condemine, Charlotte

AU - Hesketh, Josie

AU - Archer, John

AU - Jones, Sam

AU - Kayuni, Sekeleghe A.

AU - Musaya, Janelisa

AU - Stanton, Michelle C.

AU - Stothard, J. Russell

AU - Fronterre, Claudio

AU - Jewell, Christopher

PY - 2024/6/27

Y1 - 2024/6/27

N2 - Background: Along the southern shoreline of Lake Malawi, the incidence of schistosomiasis is increasing with snails of the genera Bulinus and Biomphalaria transmitting urogenital and intestinal schistosomiasis, respectively. Since the underlying distribution of snails is partially known, often being focal, developing pragmatic spatial models that interpolate snail information across under-sampled regions is required to understand and assess current and future risk of schistosomiasis. Methods: A secondary geospatial analysis of recently collected malacological and environmental survey data was undertaken. Using a Bayesian Poisson latent Gaussian process model, abundance data were fitted for Bulinus and Biomphalaria. Interpolating the abundance of snails along the shoreline (given their relative distance along the shoreline) was achieved by smoothing, using extracted environmental rainfall, land surface temperature (LST), evapotranspiration, normalised difference vegetation index (NDVI) and soil type covariate data for all predicted locations. Our adopted model used a combination of two-dimensional (2D) and one dimensional (1D) mapping. Results: A significant association between normalised difference vegetation index (NDVI) and abundance of Bulinus spp. was detected (log risk ratio − 0.83, 95% CrI − 1.57, − 0.09). A qualitatively similar association was found between NDVI and Biomphalaria sp. but was not statistically significant (log risk ratio − 1.42, 95% CrI − 3.09, 0.10). Analyses of all other environmental data were considered non-significant. Conclusions: The spatial range in which interpolation of snail distributions is possible appears < 10km owing to fine-scale biotic and abiotic heterogeneities. The forthcoming challenge is to refine geospatial sampling frameworks with future opportunities to map schistosomiasis within actual or predicted snail distributions. In so doing, this would better reveal local environmental transmission possibilities. Graphical Abstract:

AB - Background: Along the southern shoreline of Lake Malawi, the incidence of schistosomiasis is increasing with snails of the genera Bulinus and Biomphalaria transmitting urogenital and intestinal schistosomiasis, respectively. Since the underlying distribution of snails is partially known, often being focal, developing pragmatic spatial models that interpolate snail information across under-sampled regions is required to understand and assess current and future risk of schistosomiasis. Methods: A secondary geospatial analysis of recently collected malacological and environmental survey data was undertaken. Using a Bayesian Poisson latent Gaussian process model, abundance data were fitted for Bulinus and Biomphalaria. Interpolating the abundance of snails along the shoreline (given their relative distance along the shoreline) was achieved by smoothing, using extracted environmental rainfall, land surface temperature (LST), evapotranspiration, normalised difference vegetation index (NDVI) and soil type covariate data for all predicted locations. Our adopted model used a combination of two-dimensional (2D) and one dimensional (1D) mapping. Results: A significant association between normalised difference vegetation index (NDVI) and abundance of Bulinus spp. was detected (log risk ratio − 0.83, 95% CrI − 1.57, − 0.09). A qualitatively similar association was found between NDVI and Biomphalaria sp. but was not statistically significant (log risk ratio − 1.42, 95% CrI − 3.09, 0.10). Analyses of all other environmental data were considered non-significant. Conclusions: The spatial range in which interpolation of snail distributions is possible appears < 10km owing to fine-scale biotic and abiotic heterogeneities. The forthcoming challenge is to refine geospatial sampling frameworks with future opportunities to map schistosomiasis within actual or predicted snail distributions. In so doing, this would better reveal local environmental transmission possibilities. Graphical Abstract:

KW - Bayesian multilevel models

KW - Geospatial analysis

KW - Snail abundance

KW - Gaussian latent process

KW - Remote sensing

KW - Bulinus

KW - Biomphalaria

U2 - 10.1186/s13071-024-06353-y

DO - 10.1186/s13071-024-06353-y

M3 - Journal article

VL - 17

JO - Parasites & vectors

JF - Parasites & vectors

SN - 1756-3305

IS - 1

M1 - 272

ER -