Comparative infectivity and transmissibility studies of wild-bird and chicken-origin highly pathogenic avian influenza viruses H5N8 in chickens

Rohaim, M. A., El Naggar, R. F., Madbouly, Y., AbdelSabour, M. A., Ahmed, K. A. & Munir, M., 1/02/2021, In: Comparative Immunology, Microbiology and Infectious Diseases. 74, 9 p., 101594.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Structural Insights Into m6A-Erasers: A Step Toward Understanding Molecule Specificity and Potential Antiviral Targeting

Bayoumi, M. & Munir, M., 21/01/2021, In: Frontiers in cell and developmental biology. 8, 14 p., 587108.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Structural and functional insights into non-structural proteins of coronaviruses

Rohaim, M. A., El Naggar, R. F., Clayton, E. & Munir, M., 1/01/2021, In: Microbial pathogenesis. 150, 12 p., 104641.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Potential reverse spillover of infectious bursal disease virus at the interface of commercial poultry and wild birds

Naggar, R. F. E., Rohaim, M. A. & Munir, M., 31/12/2020, In: Virus Genes. 56, 6, p. 705–711 7 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Fundamental Characteristics of Bat Interferon Systems

Clayton, E. & Munir, M., 11/12/2020, In: Frontiers in cellular and infection microbiology. 10, 14 p., 527921.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Artificial Intelligence-Assisted Loop Mediated Isothermal Amplification (ai-LAMP) for Rapid Detection of SARS-CoV-2

Rohaim, M., Clayton, E., Sahin, I., Vilela, J., Khalifa, M., Al-Natour, M., Bayoumi, M., Poirier, A. C., Branavan, M., Tharmakulasingam, M., Choudhry, M. S., Sodi, R., Brown, A., Burkhart, P., Hacking, W., Botham, J., Boyce, J., Wilkinson, H., Williams, C., Whittingham-Dowd, J., & 8 othersShaw, E., Hodges, M., Butler, L., Bates, M., La Ragione, R., Balachandran, W., Fernando, A. & Munir, M., 1/09/2020, In: Viruses. 12, 9, 19 p., 972.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

A Scalable Topical Vectored Vaccine Candidate Against SARS-CoV-2

Rohaim, M. A. & Munir, M., 24/08/2020, In: Vaccines. 8, 3, 16 p., 472.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Structural and Virus Regulatory Insights Into Avian N6-Methyladenosine (m6A) Machinery

Bayoumi, M., Rohaim, M. A. & Munir, M., 15/07/2020, In: Frontiers in cell and developmental biology. 8, 14 p., 543.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Evolutionary analysis of infectious bronchitis virus reveals marked genetic diversity and recombination events

Rohaim, M. A., El Naggar, R. F., Abdelsabour, M. A., Mohamed, M. H. A., El-Sabagh, I. M. & Munir, M., 29/05/2020, In: Genes. 11, 6, 14 p., 605.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

MERTK is a host factor that promotes classical swine fever virus entry and antagonizes innate immune response in PK-15 cells

Zheng, G., Li, L-F., Zhang, Y., Qu, L., Wang, W., Li, M., Yu, S., Zhou, M., Luo, Y., Sun, Y., Munir, M., Li, S. & Qiu, H-J., 1/05/2020, In: Emerging Microbes and Infections. 9, 1, p. 571-581 11 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Duckling short beak and dwarfism syndrome virus infection activates host innate immune response involving both DNA and RNA sensors

Chen, S., Fang, T., Xiao, S., Lin, F., Cheng, X., Wang, S., Zhu, X., Chen, X., Zheng, M., Munir, M., Huang, M. & Yu, F., 31/01/2020, In: Microbial pathogenesis. 138, 10 p., 103816.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

A comprehensive global perspective on phylogenomics and evolutionary dynamics of Small ruminant morbillivirus

Shabbir, M. Z., Rahman, A-U. & Munir, M., 8/01/2020, In: Scientific Reports. 10, 1, 17 p., 17.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Simultaneous Deletion of Virulence Factors and Insertion of Antigens into the Infectious Laryngotracheitis Virus Using NHEJ-CRISPR/Cas9 and Cre–Lox System for Construction of a Stable Vaccine Vector

Atasoy, M., Rohaim, M. & Munir, M., 5/12/2019, In: Vaccines. 7, 4, 15 p., 207.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Evaluation of transmission potential and pathobiological characteristics of mallard originated Avian orthoavulavirus 1 (sub-genotype VII.2) in commercial broilers

Habib, M., Yaqub, T., Aziz-Ul-Rahman, Sohail, T., Shahbaz, M., Shehzad, W., Munir, M. & Shabbir, M. Z., 1/12/2019, In: Microbial pathogenesis. 137, 5 p., 103785.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

A comparative genomic and evolutionary analysis of circulating strains of Avian avulavirus 1 in Pakistan

Rahman, A., Munir, M. & Shabbir, M. Z., 30/10/2019, In: Molecular Genetics and Genomics. 294, 5, p. 1289–1309 21 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Genome-wide classification of type I, type II and type III interferon-stimulated genes in chicken fibroblasts

Santhakumar, D., Rohaim, M. A. & Munir, M., 25/10/2019, In: Vaccines. 7, 4, 17 p., 160.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Updated unified phylogenetic classification system and revised nomenclature for Newcastle disease virus

Dimitrov, K. M., Abolnik, C., Afonso, C. L., Albina, E., Bahl, J., Berg, M., Briand, F-X., Brown, I. H., Choi, K-S., Chvala, I., Diel, D. G., Durr, P. A., Ferreira, H. L., Fusaro, A., Gil, P., Goujgoulova, G. V., Grund, C., Hicks, J. T., Joannis, T. M., Kim Torchetti, M., & 20 othersKolosov, S., Lambrecht, B., Lewis, N. S., Liu, H., Liu, H., McCullough, S., Miller, P. J., Monne, I., Muller, C. P., Munir, M., Reischak, D., Sabra, M., Samal, S. K., Servan de Almeida, R., Shittu, I., Snoeck, C. J., Suarez, D. L., Van Borm, S., Wang, Z. & Wong, F. Y. K., 1/10/2019, In: Infection, Genetics and Evolution. 74, 15 p., 103917.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

A comparative phylogenomic analysis of peste des petits ruminants virus isolated from wild and unusual hosts

Rahman, A-U., Munir, M. & Shabbir, M. Z., 1/10/2019, In: Molecular Biology Reports. 46, 5, p. 5587-5593 7 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Emergence and genetic analysis of variant pathogenic 4/91 (serotype 793/B) infectious bronchitis virus in Egypt during 2019

Rohaim, M. A., El Naggar, R. F., Hamoud, M. M., Bazid, A-H. I., Gamal, A. M., Laban, S. E., Abdel-Sabour, M. A., Nasr, S. A. E., Zaki, M. M., Shabbir, M. Z., Zahran, O. K. & Munir, M., 1/10/2019, In: Virus Genes. 55, 5, p. 720-725 6 p.

Research output: Contribution to Journal/Magazine › Journal article

Co-infection of Newcastle disease virus genotype XIII with low pathogenic avian influenza exacerbates clinical outcome of Newcastle disease in vaccinated layer poultry flocks

Gowthaman, V., Singh, S. D., Dhama, K., Ramakrishnan, M. A., Malik, Y. P. S., Gopala Krishna Murthy, T. R., Chitra, R. & Munir, M., 1/09/2019, In: Virusdisease. 30, 3, p. 441–452 12 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Human Hemoglobin Subunit Beta Functions as a Pleiotropic Regulator of RIG-I/MDA5-Mediated Antiviral Innate Immune Responses

Yang, Q., Bai, S-Y., Li, L-F., Li, S., Zhang, Y., Munir, M. & Qiu, H-J., 30/07/2019, In: Journal of Virology. 93, 16, 21 p., e00718-19.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Sequence analysis and biological characterization of virulent Avian avulavirus 1 isolated from asymptomatic migratory fowl

Ul-Rahman, A., Yaqub, T., Imran, M., Habib, M., Sohail, T., Mukhtar, N., Shahid, M. F., Munir, M. & Shabbir, M. Z., 3/05/2019, (E-pub ahead of print) In: Acta virologica. 63, 2, p. 223-228 6 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Dynamic expression of interferon lambda regulated genes in primary fibroblasts and immune organs of the chicken

Arslan, M., Yang, X., Santhakumar, D., Liu, X., Hu, X., Munir, M., Li, Y. & Zhang, Z., 14/02/2019, In: Virus Genes. 10, 2, 14 p., 145.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Genetic diversity and phylodynamics of avian coronaviruses in Egyptian wild birds

Rohaim, M. A., El Naggar, R. F., Helal, A. M., Bayoumi, M. M., El-Saied, M. A., Ahmed, K. A., Shabbir, M. Z. & Munir, M., 2019, In: Viruses. 11, 1, 16 p., 57.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Oxidative Stress in Poultry: Lessons from the Viral Infections

Rehman, Z. U., Meng, C., Sun, Y., Safdar, A., Pasha, R. H., Munir, M. & Ding, C., 10/12/2018, In: Oxidative Medicine and Cellular Longevity. 2018, 14 p., 5123147.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Genetic characterization of small ruminant morbillivirus from recently emerging wave of outbreaks in Pakistan

Shabbir, M. Z., Ul-Rahman, A., Zahid, M. N. & Munir, M., 6/12/2018, In: Transboundary and Emerging Diseases. 65, 6, p. 2032-2038 7 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Phylogenomics and Infectious Potential of Avian Avulaviruses Species-Type 1 Isolated from Healthy Green-Winged Teal (Anas carolinensis) from a Wetland Sanctuary of Indus River

[No Value], A-U-R., Yaqub, T., Imran, M., Habib, M., Sohail, T., Shahid, M. F., Munir, M. & Shabbir, M. Z., 2/12/2018, In: Avian Diseases. 62, 4, p. 404-415 12 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Potential of genotype VII Newcastle disease viruses to cause differential infections in chickens and ducks

Meng, C., Rehman, Z. U., Liu, K., Qiu, X., Tan, L., Sun, Y., Liao, Y., Song, C., Yu, S., Ding, Z., Nair, V., Munir, M. & Ding, C., 12/2018, In: Transboundary and Emerging Diseases. 65, 6, p. 1851-1862 12 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Production, characterization, and epitope mapping of a monoclonal antibody against genotype VII Newcastle disease virus V protein

Li, J., Meng, C., Ren, T., Wang, W., Zhang, Y., Yuan, W., Xu, S., Sun, Y., Tan, L., Song, C., Liao, Y., Nair, V., Munir, M., Ding, Z., Liu, X., Qiu, X. & Ding, C., 1/10/2018, In: Journal of Virological Methods. 260, p. 88-97 10 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Biological characterization of wild-bird-origin avian avulavirus 1 and efficacy of currently applied vaccines against potential infection in commercial poultry

El Naggar, R. F., Rohaim, M. A., Bazid, A. H., Ahmed, K. A., Hussein, H. A. & Munir, M., 10/2018, In: Archives of Virology. 163, 10, p. 2743-2755 13 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Comparative evolutionary and phylogenomic analysis of Avian avulaviruses 1 to 20

ul-Rahman, A., Munir, M. & Zubair Shabbir, M., 10/2018, In: Molecular Phylogenetics and Evolution. 127, p. 931-951 21 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Chickens Expressing IFIT5 Ameliorate Clinical Outcome and Pathology of Highly Pathogenic Avian Influenza and Velogenic Newcastle Disease Viruses

Rohaim, M. A., Santhakumar, D., Naggar, R. F. E., Iqbal, M., Hussein, H. A. & Munir, M., 14/09/2018, In: Frontiers in Immunology. 9, 14 p., 2025.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Meeting report: Global alliance for research on avian diseases 2018, International Conference, January 17 to 19, 2018, Hanoi, Vietnam

Iqbal, M., Lukosaityte, D., Munir, M. & Nair, V., 10/09/2018, In: Avian Diseases. 63, Suppl.1, p. 251-257 7 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Genomic and biological characterization of Newcastle disease viruses isolated from migratory mallards (Anas platyrhynchos)

Habib, M., Yaqub, T., Nazir, J., Shehzad, W., Aziz-Ul-Rahman, Sohail, T., Mukhtar, N., Mehboob, A., Munir, M. & Shabbir, M. Z., 08/2018, In: Archives of Virology. 163, 8, p. 2179-2188 10 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Supplementation of Vitamin E Protects Chickens from Newcastle Disease Virus-Mediated Exacerbation of Intestinal Oxidative Stress and Tissue Damage

Rehman, Z. U., Che, L., Ren, S., Liao, Y., Qiu, X., Yu, S., Sun, Y., Tan, L., Song, C., Liu, W., Ding, Z., Munir, M., Nair, V., Meng, C. & Ding, C., 27/06/2018, In: Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology. 47, 4, p. 1655-1666 12 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

The E2 glycoprotein is necessary but not sufficient for the adaptation of classical swine fever virus lapinized vaccine C-strain to the rabbit

Li, Y., Xie, L., Zhang, L., Wang, X., Li, C., Han, Y., Hu, S., Sun, Y., Li, S., Luo, Y., Liu, L., Munir, M. & Qiu, H-J., 06/2018, In: Virology. 519, p. 197-206 10 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

RING-Domain E3 Ligase-Mediated Host–Virus Interactions: Orchestrating Immune Responses by the Host and Antagonizing Immune Defense by Viruses

Zhang, Y., Li, L-F., Munir, M. & Qiu, H., 22/05/2018, In: Frontiers in Immunology. 9, 12 p., 1083.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Chicken Interferon-induced Protein with Tetratricopeptide Repeats 5 Antagonizes Replication of RNA Viruses

Santhakumar, D., Rohaim, M. A. M. S., Hussein, H. A., Hawes, P., Ferreira, H. L., Behboudi, S., Iqbal, M., Nair, V., Arns, C. W. & Munir, M., 1/05/2018, In: Scientific Reports. 8, 1, 20 p., 6794.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

NDV entry into dendritic cells through macropinocytosis and suppression of T lymphocyte proliferation

Tan, L., Zhang, Y., Qiao, C., Yuan, Y., Sun, Y., Qiu, X., Meng, C., Song, C., Liao, Y., Munir, M., Nair, V., Ding, Z., Liu, X. & Ding, C., 05/2018, In: Virology. 518, p. 126-135 10 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Vitamin E Supplementation Ameliorates Newcastle Disease Virus-Induced Oxidative Stress and Alleviates Tissue Damage in the Brains of Chickens

Rehman, Z. U., Qiu, X., Sun, Y., Liao, Y., Tan, L., Song, C., Yu, S., Ding, Z., Munir, M., Nair, V., Meng, C. & Ding, C., 3/04/2018, In: Viruses. 10, 4, 15 p., 173.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

The Application of NHEJ-CRISPR/Cas9 and Cre-Lox System in the Generation of Bivalent Duck Enteritis Virus Vaccine against Avian Influenza Virus

Chang, P., Yao, Y., Tang, N., Sadeyen, J-R., Sealy, J., Clements, A., Bhat, S., Munir, M., Bryant, J. E. & Iqbal, M., 13/02/2018, In: Viruses. 10, 2, 11 p., 81.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Long Non-Coding RNAs: Emerging and Versatile Regulators in Host-Virus Interactions

Meng, X-Y., Luo, Y., Anwar, M. N., Sun, Y., Gao, Y., Zhang, H., Munir, M. & Qiu, H-J., 28/11/2017, In: Frontiers in Immunology. 8, 10 p., 1663.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Evolutionary insights into the fusion protein of Newcastle disease virus isolated from vaccinated chickens in 2016 in Egypt

Orabi, A., Hussein, A., Saleh, A. A., El-Magd, M. A. & Munir, M., 10/2017, In: Archives of Virology. 162, 10, p. 3069-3079 11 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Re-Emergence of a Novel H5N1 Avian Influenza Virus Variant Subclade 2.2.1.1 in Egypt During 2014

Rohaim, M. A., El-Naggar, R. F., Hamoud, M. M., Nasr, S. A., Ismael, E., Laban, S. E., Ahmed, H. A. & Munir, M., 08/2017, In: Transboundary and Emerging Diseases. 64, 4, p. 1306-1312 7 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Reverse spillover of avian viral vaccine strains from domesticated poultry to wild birds

Rohaim, M. A., El Naggar, R. F., Helal, A. M., Hussein, H. A. & Munir, M., 16/06/2017, In: Vaccine. 35, 28, p. 3523-3527 5 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Chicken IFN Kappa: A Novel Cytokine with Antiviral Activities

Santhakumar, D., Iqbal, M., Nair, V. & Munir, M., 2/06/2017, In: Scientific Reports. 7, 13 p., 2719.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Avian Interferons and Their Antiviral Effectors

Santhakumar, D., Rubbenstroth, D., Martinez-Sobrido, L. & Munir, M., 31/01/2017, In: Frontiers in Immunology. 8, 17 p., 49.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Infectivity of wild bird-origin avian paramyxovirus serotype 1 and vaccine effectiveness in chickens

Shabbir, M. Z., Akhtar, S., Tang, Y., Yaqub, T., Ahmad, A., Mustafa, G., Alam, M. A., Santhakumar, D., Nair, V. & Munir, M., 12/2016, In: Journal of General Virology. 97, 12, p. 3161-3173 13 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Detection of Inter-Lineage Natural Recombination in Avian Paramyxovirus Serotype 1 Using Simplified Deep Sequencing Platform

Satharasinghe, D. A., Murulitharan, K., Tan, S. W., Yeap, S. K., Munir, M., Ideris, A. & Omar, A. R., 30/11/2016, In: Frontiers in Microbiology. 7, 14 p., 1907.

Research output: Contribution to Journal/Magazine › Journal article › peer-review

Mitogen-activated Protein Kinase Kinase 2 (MEK2), a Novel E2-interacting Protein, Promotes the Growth of Classical Swine Fever Virus via Attenuation of the JAK-STAT Signaling Pathway

Wang, J., Chen, S., Liao, Y., Zhang, E., Feng, S., Yu, S., Li, L-F., He, W-R., Li, Y., Luo, Y., Sun, Y., Zhou, M., Wang, X., Munir, M., Li, S. & Qiu, H-J., 11/2016, In: Journal of Virology. 90, 22, p. 10271-10283 13 p.

Research output: Contribution to Journal/Magazine › Journal article › peer-review